FC930506

Overview
NameFC930506
Unique NameFC930506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 72/178 (40.45%), Postives = 103/178 (57.87%), Query Frame = 1
Query:  178 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYA 696
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD A
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNA 186          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYA 696
            F++W+V+H K Y++  E   R + F  NLR I+ HN+ N T+K+GLN+F+D++ +E +  +L +    +  +  + +SN YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   A
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWS----EPQNCSATKSN-YLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQA 189          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29
Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYA 696
            F  +  ++GK Y ++ E + RF +FKENL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S++    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   A
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQA 213          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 71/178 (39.89%), Postives = 103/178 (57.87%), Query Frame = 1
Query:  178 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYA 696
            S++ + D  + A +  W   HG+ Y  + E+  R  ++++N++ I+ HN E       + + +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD A
Sbjct:   16 SAAPKLDQNLDADWYKWKATHGRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNA 186          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 73/196 (37.24%), Postives = 107/196 (54.59%), Query Frame = 1
Query:  121 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYA 696
            V S L + +VSY    +  S       +    F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ +LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  A
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLA 186          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 696
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  A
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNA 185          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 696
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  A
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNA 185          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.592e-28
Identity = 71/171 (41.52%), Postives = 96/171 (56.14%), Query Frame = 1
Query:  184 SWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 696
            S   ++ +   F A+  K+GK Y    E+  RF  F+EN+       + N     G+  F+D+T EE+R+ +   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD A
Sbjct:   30 SLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNA 196          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.592e-28
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 696
            +E W   + K YN+ G++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +  A R+     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  A
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNA 185          
BLAST of FC930506 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 1
Query:  211 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYA 696
            A +  W   H + Y  + E+  R  ++++N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYA
Sbjct:   27 AQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYA 186          
The following BLAST results are available for this feature:
BLAST of FC930506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL1_BOVIN5.222e-2940.45Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATH_BOVIN6.820e-2944.44Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEUL_ARATH6.820e-2944.44Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATL1_PIG8.908e-2939.89Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CYSP4_DICDI1.163e-2837.24Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATK_MACMU1.984e-2843.98Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.984e-2843.98Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CYSP_TRYBB2.592e-2841.52Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATK_BOVIN2.592e-2843.98Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATL1_CERAE4.421e-2840.72Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC34008C08EF PostHarvC1 Citrus clementina cDNA clone C34008C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930506 ID=FC930506; Name=FC930506; organism=Citrus clementina; type=EST; length=697bp
GAAACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCAT
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