FC930520

Overview
NameFC930520
Unique NameFC930520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP5_CERAE (FK506-binding protein 5 OS=Cercopithecus aethiops GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = 2
Query:  152 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            G+ I    D GV+K + R    +      D   V VHY+G L+  G+ F+++H+ N  F F LGK  VI+AWDI + +MK GE+  L CKPEYAYGSAGS P +P +ATL FE+EL+
Sbjct:   22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDK--VYVHYKGKLSN-GKKFNSSHDRNEPFVFSLGKSQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSVPKIPSNATLFFEIELL 135          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP5_AOTNA (FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 53/121 (43.80%), Postives = 76/121 (62.81%), Query Frame = 2
Query:  152 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVD----VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            G+ +    D GV+K + R      +   E+ P++     VHY G L+  G+ FD++H+ N  F F +GKG VI+AWDI + +MK GE+  L CKPEYAYG+ GS P +P +ATL FE+EL+
Sbjct:   22 GEDVTSKKDRGVLKIVKR------VGHGEETPMIGDKVYVHYNGKLSN-GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEIELL 135          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP5_MOUSE (FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.200e-21
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 2
Query:  152 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            G+ I    D GV+K + R    D      D   V VHY+G L++ G+ FD++H+    F+F LG+G VI+AWDI + +MK GE+  L CKPEYAYGSAG    +P +ATL FE+EL+
Sbjct:   22 GEDITTKKDRGVLKIVKRVGTSDEAPMFGDK--VYVHYKGMLSD-GKKFDSSHDRKKPFAFSLGQGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGSAGHLQKIPSNATLFFEIELL 135          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP5_RHIOR (FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP5 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.282e-19
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  167 LTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            LT D GV K+I++        PT     V VHY+  L +T E FD++ + NT F+F+L    VI AW++A+ +M+VGE+A++ C  +Y YG  G    VPP A L FEVEL+
Sbjct:    4 LTPDGGVTKRIIKAGLGQRPEPTN---FVSVHYDAYLLDTSEKFDSSRDRNTEFTFQLRDSKVIEAWELAIPTMQVGELAEIICTSDYGYGDQGRQYIVPPRAQLRFEVELI 112          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.164e-18
Identity = 46/111 (41.44%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  173 GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVA 505
            G +G+ KK++++   +     E    V+VHY G+L + G+ FD++ + +  F F+LG+G VI+ WD  +++MK GE A  T  PE AYG +GSPP +P +ATL F+VEL++
Sbjct:   39 GKQGLKKKLLKEG--EGWDTPEVGDEVEVHYTGTLLD-GKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLS 146          

HSP 2 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  164 DLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPD--VPPDATLIFEVELVA 505
            ++  D+ ++KK++++   +      +  +V V   G L +        H++   F F+  + +VI   D A+ +MK GEVA +T  PEYAYGS  S  D  VPP++T+I+EVELV+
Sbjct:  269 EIGDDKKILKKVLKEX--EGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVS 382          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V VHY G+L + G  FD++ + N  F F +GKG VIR WD  +  + VG+ AKL C P+YAYGS G P  +PP++TL F+VEL+
Sbjct:   23 VTVHYTGTL-DDGTKFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPGVIPPNSTLTFDVELL 105          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  179 EGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            +G+ KK++++   +     E+   V+VHY G+L + G  FD++ +  T F F LG+G VI+ WDI +++MK GE A  T   E AYG +GSPP +P +ATL F+VEL+
Sbjct:   38 QGLKKKLLKEG--EGYETPENGDEVEVHYTGTLLD-GTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELL 142          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB1A_EMENI (FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.816e-17
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V +HY G+LA+ G  FD++ +    F  ++G G VI+ WD  +  + VGE AKL C P+YAYG+ G PP +PP+ATL FEVEL+
Sbjct:   23 VSIHYTGTLAD-GSKFDSSRDRPGTFVTQIGVGRVIKGWDEGVLQLSVGEKAKLICTPDYAYGARGFPPVIPPNATLTFEVELL 105          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB1A_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos taurus GN=FKBP1A PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.816e-17
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 2
Query:  257 VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            VHY G L E G+ FD++ + N  F F LGK  VIR W+  +  M VG+ AKLT  P+YAYG+ G P  +PP+ATLIF+VEL+
Sbjct:   25 VHYTGML-EDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELL 105          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB1A_XENLA (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xenopus laevis GN=fkbp1a PE=3 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V VHY GSL E G+ FD++ + N  F F +G+  VIR W+  +  M VG+ A+LTC P++AYG+ G P  +PP+ATL F+VEL+
Sbjct:   23 VVVHYVGSL-ENGKKFDSSRDRNKPFKFIIGRCEVIRGWEEGVAQMSVGQRARLTCSPDFAYGATGHPGIIPPNATLTFDVELL 105          
The following BLAST results are available for this feature:
BLAST of FC930520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FKBP5_CERAE3.159e-2247.01FK506-binding protein 5 OS=Cercopithecus aethiops ... [more]
FKBP5_AOTNA4.125e-2243.80FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP... [more]
FKBP5_MOUSE1.200e-2146.15FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 P... [more]
FKBP5_RHIOR7.282e-1942.86FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP... [more]
FKB70_WHEAT6.164e-1841.4470 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKB12_DROME1.373e-1750.0012 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKB70_ARATH2.342e-1742.5970 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKB1A_EMENI6.816e-1748.81FK506-binding protein 1A OS=Emericella nidulans GN... [more]
FKB1A_BOVIN6.816e-1752.44Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos ... [more]
FKB1A_XENLA1.518e-1648.81Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xeno... [more]

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Properties
Property NameValue
Genbank descriptionC34008D10EF PostHarvC1 Citrus clementina cDNA clone C34008D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930520 ID=FC930520; Name=FC930520; organism=Citrus clementina; type=EST; length=751bp
GACTCACTAGACGCCTATGGCCACCAAAATCCACGGCAATTTCTCCCGAT
TTATTGTCCCCGAGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGAT
AATTTTCATCTCATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTAT
GGGTGATTCAATTGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCG
TAAGGCAAGCTAAACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTT
GTTGATGTTCATTATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGA
TACCACACATGAAGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTT
CAGTGATTCGGGCTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAG
GTTGCAAAACTCACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATC
TCCTCCAGATGTCCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGG
TGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAG
AGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAGAGAGCTTGCTGCTGCTGC
GAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCCNAAGCTGCAGCAGCTG
CTCGTATTCAAGCCAAATGGAAGCCAAGAAGGTCAGGAAAGGGGAAAGCA
AGGGGAAATAGGGTATGTATCCCGCTCATATGGATAGCGATATGTGTGAT
G
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