FC930520

Overview
NameFC930520
Unique NameFC930520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP7_PONAB (FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 2 
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFS--FELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAG-SPPDVPPDATLIFEVELVA 505
            L++ HY+G LA+ G  F  +   N      F LG G VI+  DIA+  M  GE  K+   P +AYG  G +   +PPDATLIFE+EL A
Sbjct:   55 LLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYA 143
[Close]
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2 
Query:  257 VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            +HY G+L   G+ FD++ +  T F F++G G VI+ WD  +  M VGE  KL   P   YG  G+   +P ++ LIF+VEL+
Sbjct:   50 IHYTGTLLN-GDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGDKIPGNSHLIFDVELI 130
The following BLAST results are available for this feature:
BLAST of FC930520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FKBP7_PONAB7.299e-1143.82FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 P... [more]
FKBP2_DICDI7.299e-1140.24FK506-binding protein 2 OS=Dictyostelium discoideu... [more]

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Properties
Property NameValue
Genbank descriptionC34008D10EF PostHarvC1 Citrus clementina cDNA clone C34008D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930520 ID=FC930520; Name=FC930520; organism=Citrus clementina; type=EST; length=751bp
GACTCACTAGACGCCTATGGCCACCAAAATCCACGGCAATTTCTCCCGAT
TTATTGTCCCCGAGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGAT
AATTTTCATCTCATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTAT
GGGTGATTCAATTGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCG
TAAGGCAAGCTAAACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTT
GTTGATGTTCATTATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGA
TACCACACATGAAGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTT
CAGTGATTCGGGCTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAG
GTTGCAAAACTCACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATC
TCCTCCAGATGTCCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGG
TGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAG
AGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAGAGAGCTTGCTGCTGCTGC
GAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCCNAAGCTGCAGCAGCTG
CTCGTATTCAAGCCAAATGGAAGCCAAGAAGGTCAGGAAAGGGGAAAGCA
AGGGGAAATAGGGTATGTATCCCGCTCATATGGATAGCGATATGTGTGAT
G
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