Overview
Name FC930520
Unique Name FC930520
Type EST
Organism Citrus clementina (Clementine)
Sequence length 751
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match:
FKBP7_PONAB (FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 PE=2 SV=1)
HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 2
Query: 248 LVDVHYEGSLAETGEVFDTTHEDNTVFS--FELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAG-SPPDVPPDATLIFEVELVA 505
L++ HY+G LA+ G F + N F LG G VI+ DIA+ M GE K+ P +AYG G + +PPDATLIFE+EL A
Sbjct: 55 LLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYA 143
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match:
FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)
HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2
Query: 257 VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
+HY G+L G+ FD++ + T F F++G G VI+ WD + M VGE KL P YG G+ +P ++ LIF+VEL+
Sbjct: 50 IHYTGTLLN-GDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGDKIPGNSHLIFDVELI 130
The following BLAST results are available for this feature:
BLAST of FC930520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 82
100 200 300 400 500 600 700 Expect = 7.30e-11 / Id = 43.82 Expect = 7.30e-11 / Id = 40.24 Sequence FKBP7_PONAB FKBP2_DICDI
Match Name E-value Identity Description
FKBP7_PONAB 7.299e-11 43.82 FK506-binding protein 7 OS=Pongo abelii GN=FKBP7 P... [more]
FKBP2_DICDI 7.299e-11 40.24 FK506-binding protein 2 OS=Dictyostelium discoideu... [more]
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Properties
Property Name Value
Genbank description C34008D10EF PostHarvC1 Citrus clementina cDNA clone C34008D10, mRNA sequence.
Sequences
The
following sequences are available for this feature:
EST sequence
>FC930520 ID=FC930520; Name=FC930520; organism=Citrus clementina; type=EST; length=751bp GACTCACTAGACGCCTATGGCCACCAAAATCCACGGCAATTTCTCCCGAT TTATTGTCCCCGAGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGAT AATTTTCATCTCATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTAT GGGTGATTCAATTGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCG TAAGGCAAGCTAAACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTT GTTGATGTTCATTATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGA TACCACACATGAAGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTT CAGTGATTCGGGCTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAG GTTGCAAAACTCACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATC TCCTCCAGATGTCCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGG TGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAG AGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAGAGAGCTTGCTGCTGCTGC GAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCCNAAGCTGCAGCAGCTG CTCGTATTCAAGCCAAATGGAAGCCAAGAAGGTCAGGAAAGGGGAAAGCA AGGGGAAATAGGGTATGTATCCCGCTCATATGGATAGCGATATGTGTGAT G back to top