FC930526

Overview
NameFC930526
Unique NameFC930526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_MOUSE (UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus GN=Ugp2 PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36
Identity = 79/191 (41.36%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  143 SENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLP---CKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            ++ + +GF  L  R+L  +   V+W KIQ P ++ + PY+ +      P                      MGC GPKS+I VRN  TFLDL V QIE+LN  Y  +VPL+LMNSFNT +DT KI++KY+   V+I+TFNQS+YPR+  +  +P+         + + WYPPGHGD++ S  NSG LD  I
Sbjct:   51 TKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-ARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPIAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_CRIGR (UTP--glucose-1-phosphate uridylyltransferase OS=Cricetulus griseus GN=UGP2 PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36
Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  110 LKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLP---CKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            L +A +   + ++ + +GF  L  R+L  +   V+W KIQ P ++ + PY+ +      P                      MGC GPKS+I VRN  TFLDL V QIE+LN  Y  +VPL+LMNSFNT +DT KI++KY+   V+I+TFNQS+YPR+  +  +P+           + WYPPGHGD++ S  NSG LD  +
Sbjct:   40 LTTATSHEYEHTKKDLDGFRKLYHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-ARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKSYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSSSGESTEAWYPPGHGDIYASFYNSGLLDTFL 240          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_PIG (UTP--glucose-1-phosphate uridylyltransferase OS=Sus scrofa GN=UGP2 PE=2 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36
Identity = 79/191 (41.36%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  143 SENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLP---CKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            ++ + +GF  L  R+L  +   V+W KIQ P ++ + PY+ +      P                      MGC GPKS+I VRN  TFLDL V QIE+LN  Y  +VPL+LMNSFNT +DT KI++KY+   V+I+TFNQS+YPR+  +  +P+         + + WYPPGHGD++ S  NSG LD  I
Sbjct:   51 TKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-ARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_HUMAN (UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 PE=1 SV=5)

HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36
Identity = 79/191 (41.36%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  143 SENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLP---CKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            ++ + +GF  L  R+L  +   V+W KIQ P ++ + PY+ +      P                      MGC GPKS+I VRN  TFLDL V QIE+LN  Y  +VPL+LMNSFNT +DT KI++KY+   V+I+TFNQS+YPR+  +  +P+         + + WYPPGHGD++ S  NSG LD  I
Sbjct:   51 TKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-ARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA_BOVIN (UTP--glucose-1-phosphate uridylyltransferase OS=Bos taurus GN=UGP2 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36
Identity = 79/193 (40.93%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  143 SENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAP--VPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLP---CKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            ++ + +GF  L  R+L  +   V+W KIQ P ++ + PY+ +    +P++ +                     MGC GPKS+I VRN  TFLDL V QIE+LN  Y  +VPL+LMNSFNT +DT KI++KY+   V+I+TFNQS+YPR+  +  +P+         + + WYPPGHGD++ S  NSG LD  I
Sbjct:   51 TKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNVSSVLNKLVVVKLNGGLGTS---MGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYDTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKNVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA1_ENCCU (UTP--glucose-1-phosphate uridylyltransferase OS=Encephalitozoon cuniculi GN=UGP1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 83/218 (38.07%), Postives = 116/218 (53.21%), Query Frame = 2
Query:   62 LDRINHMATDAEKLTQLKSAVAGLNQISENEKN--GFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPL-PCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            LD  +   T  + L ++K  + GL +   N  N   F  L  RYL    + + W KI++P D IV        +PE   +                    MGC GPKS I +++G  F+DL+V QI  LN+KY  +VPL+LMNSFNT   T KII +Y      I  F+QS++PR+ ++  +P+ P  G  DK G YPPGHGD+F S+ NSG L+ L+
Sbjct:   23 LDEFDDKCT-CKLLKEMKETLEGLKKSHPNPTNLDEFYRLFERYLRTRHEKIVWEKIRSPKDRIV----QYNEIPEPTEKSKELLRKLAILKLNGGLGTTMGCVGPKSAITIKDGKNFIDLVVKQIRYLNSKYKIDVPLILMNSFNTEGMTDKIIFRYD----GIKKFSQSKFPRISSETLLPVSPSHG--DK-GMYPPGHGDLFYSMKNSGMLEELL 228          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA2_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC794.10 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 53/117 (45.30%), Postives = 84/117 (71.79%), Query Frame = 2
Query:  356 MGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            +G   PK++IEVR+  +FLDL + QIE LN +Y  +VP +LMNS++T+D+T K++ KY+   ++I TF QS+YPR+  D  +P+P    +  + WYPPGHGD+F +L++SG ++ L+
Sbjct:  116 LGVNYPKAMIEVRDNQSFLDLSIRQIEYLNRRYDVSVPFILMNSYDTNDETCKVLRKYAGCKIDISTFEQSRYPRVFVDSQLPVPKAAPSPIEEWYPPGHGDIFDALVHSGTIERLL 232          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA1_DICDI (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Dictyostelium discoideum GN=uppA PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 2
Query:  203 QHVEWSKIQTPTDEIVVP-------YDSLAPV-PEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCAD--DFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            +H   +K Q  TDEI +P       Y  L  V P D +                     MGC   KS +E+  G+TFLD+ V  IE +N  Y  +VPL++MNS+ TH++T+K+IEKY    V I TF QS +P++  D  + VP P      K+ WYPPG GD+F SL  SG +D  +
Sbjct:   75 RHAYINKDQIYTDEIKIPNKTEMVDYHQLHLVSPIDQSNASRLLNKLVVIKLNGGLGNSMGCKTAKSTMEIAPGVTFLDMAVAHIEQINQDYNVDVPLVIMNSYKTHNETNKVIEKYKTHKVSIKTFQQSMFPKMYKDTLNLVPKPNTPMNPKE-WYPPGSGDIFRSLQRSGLIDEFL 251          
BLAST of FC930526 vs. ExPASy Swiss-Prot
Match: UGPA2_YEAST (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=YHL012W PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2
Query:  380 VIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEK-YSKSNVEIHTFNQSQYPRLCADDFVPLPCK-GKTDKDGWYPPGHGDVFPSLMNSGQLDALI 706
            + EV+NG++ LD+IV Q +NLN +Y  +VPL+ M S  T    S  +E+ YS S V   T  QS +P++  D  +P+  +    + D WYP G G++  +L  SG+LD LI
Sbjct:  119 LFEVKNGMSSLDVIVRQTQNLNVRYNSDVPLIFMTSLETESQVSNFLEEHYSSSKVRWKTVVQSSFPQIDKDRLLPIDLQINSHENDFWYPCGTGNLTDTLYFSGELDKLI 229          
The following BLAST results are available for this feature:
BLAST of FC930526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_MOUSE3.462e-3641.36UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_CRIGR3.462e-3639.60UTP--glucose-1-phosphate uridylyltransferase OS=Cr... [more]
UGPA_PIG4.522e-3641.36UTP--glucose-1-phosphate uridylyltransferase OS=Su... [more]
UGPA_HUMAN4.522e-3641.36UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_BOVIN5.906e-3640.93UTP--glucose-1-phosphate uridylyltransferase OS=Bo... [more]
UGPA1_ENCCU2.839e-3038.07UTP--glucose-1-phosphate uridylyltransferase OS=En... [more]
UGPA2_SCHPO2.249e-2745.30Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA1_DICDI1.234e-2538.20UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA2_YEAST2.580e-1539.64Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC34008E04EF PostHarvC1 Citrus clementina cDNA clone C34008E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930526 ID=FC930526; Name=FC930526; organism=Citrus clementina; type=EST; length=708bp
GGTGCCTTCACTCTCTGCTTTCAAAATATAGCGTCTCTTCTTCTAGATTC
ATCTTCCTCGTTTAGACCGAATCAATCACATGGCCACTGACGCCGAGAAG
CTCACTCAGCTCAAATCTGCCGTTGCTGGCCTCAATCAAATCAGTGAAAA
TGAGAAAAATGGATTCATCAACCTCGTTGCTCGCTATCTAAGCGGCGAAG
CGCAACACGTGGAATGGAGCAAAATCCAAACGCCTACTGATGAAATCGTA
GTTCCTTATGACAGCTTGGCACCAGTTCCTGAAGATCCAGCGGAAACCAA
AAAGCTTTTGGATAAGCTTGTCGTGTTGAAGCTCAATGGAGGTTTGGGAA
CCACAATGGGCTGCACTGGTCCCAAGTCTGTTATTGAAGTTCGTAACGGG
TTGACATTTCTTGACCTCATCGTCATCCAGATTGAGAATCTCAATGCTAA
ATATGGATGTAATGTTCCCCTGCTACTCATGAACTCGTTCAACACGCATG
ATGATACATCGAAGATTATAGAGAAGTACTCCAAATCAAATGTCGAGATT
CATACTTTTAACCAGAGCCAGTATCCTCGATTGTGTGCCGATGATTTTGT
GCCCTTACCATGCAAAGGGAAGACTGACAAGGATGGATGGTATCCTCCTG
GCCACGGTGATGTCTTCCCATCCTTAATGAACAGCGGNCAGCTTGACGCT
TTAATTTC
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