FC930528

Overview
NameFC930528
Unique NameFC930528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:21..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.491e-34
Identity = 74/165 (44.85%), Postives = 100/165 (60.61%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 708
            F  + V+HGK Y    E ++RF IF E+L  +   N     Y++G+NRFAD++ EE+++  LGA      T   + R      R   ALP++ DWR+ G V+ VKDQG CGSCW FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AFE+I
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYI 221          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.491e-34
Identity = 75/181 (41.44%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  172 SKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            S +S     D +M  FE W+ ++G+ Y    EK  RF+IFK N+  I+  N+ N  +Y +G+N+F D+TN E+ + + G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFII 197          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.549e-34
Identity = 79/168 (47.02%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            F  W++ H + Y++  E   RF IFK N+ +I+E N++     +GLN FAD+TNEEYR+ +LG  F A  +SL+   S +     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYII 191          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 78/173 (45.09%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFII 711
            F  +  K GK Y +  E + RF +FK NLR    H   + +   G+ +F+DLT  E+R  HLG R G K      K +N+      E LP+  DWR  GAV  VK+QGSCGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +
Sbjct:   51 FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLP----KDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTL 219          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 708
            F  + ++H K Y+++ E ++RFEIF +NL+ I  HN +  +YK+G+N F DLT +E+R   LGA      T+    + N  L  V   LP++ DWRK G V+ VK QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATT----KGNLKLTNV--VLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYI 215          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33
Identity = 84/212 (39.62%), Postives = 119/212 (56.13%), Query Frame = 1
Query:  103 LLFLF-TVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFII 711
            L+F+F +VS   D  ++      E++     ++D     F  +  K GK Y ++ E   RF +FK NL     H   + + + G+ +F+DLT  E+R  HLG + G K    K       LP   + LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +
Sbjct:   13 LIFVFVSVSVCGDEDVLIRQVVDETEPKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLP--KDANQAPILPT--QNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTL 216          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 75/175 (42.86%), Postives = 105/175 (60.00%), Query Frame = 1
Query:  193 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFII 711
            ++ +    F  W +K  + Y++  E   R+ IFK N+ ++D  NS+  +  V GLN FAD+TNEEYR  +LG R  A   +    R    +  + +  P S+DWR K AV  +KDQG CGSCW+FST  + EG + + T  L+SLSEQ LVDC     N GC+GGLM+ AF++II
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDL-QTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYII 200          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.698e-33
Identity = 82/200 (41.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  121 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            V SAL + +VS     +  S     + E    F  W++ H + Y++  E   R+ IFK N+ +++E N++     +GLN FAD++NEEYR+ +LG  F A  +SL+   S++      +     VDWR +GAV  +K+QG CG CW+FST  A EG   +  G  +L+SLSEQ L+DC  SY N GC GGLM  AFE+II
Sbjct:    3 VLSALCVLLVSVATAKQQLS-----EVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDA--SSLEMTESDKIFDASAQ-----VDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYII 189          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 1
Query:  226 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            W   +GK Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF++II
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYII 192          
BLAST of FC930528 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.047e-32
Identity = 78/174 (44.83%), Postives = 104/174 (59.77%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFII 711
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R   LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLL 216          
The following BLAST results are available for this feature:
BLAST of FC930528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ORYC_ORYSJ2.491e-3444.85Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
ANAN_ANACO2.491e-3441.44Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CYSP6_DICDI5.549e-3447.02Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
RD19A_ARATH9.466e-3445.09Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP3_SOLLC1.236e-3346.06Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
A494_ARATH1.236e-3339.62Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP2_DICDI2.754e-3342.86Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP7_DICDI4.698e-3341.00Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CATS_SAIBB6.136e-3344.31Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CYSP_PEA1.047e-3244.83Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34008E06EF PostHarvC1 Citrus clementina cDNA clone C34008E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930528 ID=FC930528; Name=FC930528; organism=Citrus clementina; type=EST; length=711bp
GAAACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCG
AGTTCATTATT
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