FC930531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32 Identity = 64/114 (56.14%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 364 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 NI + +QLIG+TP+V+LN V +GC A +A K E+ +P S+KDR +M+ DAE K LI+PGK+ ++E TSGN GI +AF+AA KGYK++LTMP+ SLERRV +RAFGA+L+ Sbjct: 74 NIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELV 187
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32 Identity = 62/116 (53.45%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 358 ATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 A+ I +DV++LIG TPLV+LN V+EGC +A K EM +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AF AA KGYK+++TMP+ S ERR+ + AFG +L+ Sbjct: 2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELV 117
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 367 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 I +DV++LIG TPLV+LN V +GC A +A K E +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AFMAA KGYK+++TMPS SLERR+ +R F ++L+ Sbjct: 8 IAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELV 120
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 63/114 (55.26%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 364 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 +I +DV++LIG TPLV+LNKV++GC K E +P +S+KDR +M+ DAE K LI+PG + +IEPTSGN GI +AFMAA KGYK+ LTMP+ S+ERR+ ++AFGA+L+ Sbjct: 7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELV 120
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31 Identity = 61/113 (53.98%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 367 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 I DV++LIG TPLV+LN V+EGC +A K EM +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AF AA KGYK+++TMP+ S+ERR+ + AFG +L+ Sbjct: 7 IANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELV 119
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 62/137 (45.26%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 295 PAPVDSSSFAQRLRDLPKDLPATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 P PV + + Q + + NI DV+QLIG TP+V+LN+V++GC A IA K E +P S+KDR ++M+ +AEN I+P KT ++EPT+GN G+ +AF+AA KGYK+++TMP+ ++ERR+ +RA GA+++ Sbjct: 79 PPPVTTVAEEQHIAESE----TVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIV 211
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27 Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 1 Query: 367 IKRDVSQLIGRTPLVFLNKVS--EGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADL 702 I ++++LIGRTPLV LN++ EGCGA I VK E P AS+KDR + M+ AE + LI PGKT +IEPTSGN GI++A +AA KGY+++LTMP S ERR ++A+GA L Sbjct: 3 IASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKL 116
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 364 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 +I D++QLIGRTPLV L +V++G A I K E F P S+KDR VAML+ AE LI P T I+EPTSGN GI++A + A +GY+ VLTMP SLERR+ +RA+GA+LI Sbjct: 2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELI 114
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 364 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 +I D++QLIGRTPLV L +V++G A I K E F P S+KDR VAML+ AE LI P T I+EPTSGN GI++A + A +GY+ VLTMP SLERR+ +RA+GA+LI Sbjct: 2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELI 114
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 364 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 +I DV+QL+G TPLV L +V+EG A + K E F P S+KDR VAM++ AE LI P T I+EPTSGN GI++A + A +GY VLTMP S+ERR+ +RA+GA+LI Sbjct: 2 SIAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPD-TVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELI 114 The following BLAST results are available for this feature:
BLAST of FC930531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930531 ID=FC930531; Name=FC930531; organism=Citrus clementina; type=EST; length=716bpback to top |