FC930531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CBS_YEAST (Cystathionine beta-synthase OS=Saccharomyces cerevisiae GN=CYS4 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19 Identity = 48/114 (42.11%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 370 KRDVSQLIGRTPLVFLNKVSEGCGA--YIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 + +V L+G TPL+ L K+ + G I K E++ P SIKDR A +M+E+AE I P ++T+IEPTSGN GI +A + A+KGY+ ++T+P S E+ ++A GA++I Sbjct: 11 RHNVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEII 124
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CBS_RAT (Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 343 PKDLPATNIKRDVSQLIGRTPLVFLNKVSEGCG--AYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 PK LP D+ + IG TP+V +N++S+ G + K E F S+KDR ++ M+EDAE + PG T IIEPTSGN GI +A AA+KGY+ ++ MP S+E+ +RA GA+++ Sbjct: 71 PKILP------DILRKIGNTPMVRINRISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDT-IIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIV 186
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 367 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 I + + LIG TPLV LN++ A + +K E F P+ S+KDR A M+ +AE L+ PG + IIEPTSGN GI +A AA +GYK +L MP + ER ++A+GA+++ Sbjct: 4 IVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVV 115
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSM_PSEAE (Cysteine synthase B OS=Pseudomonas aeruginosa GN=cysM PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 379 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 ++ +G TPLV L ++ + VK E P S+KDRPA++M+ AE + I PG T +IE TSGN GI++A AA+KGYKM+L MP ++ ER+ M A+GA+LI Sbjct: 8 IADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSVKDRPALSMITRAELRGDIRPGDT-LIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAERKAAMTAYGAELI 115
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 361 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 + I D S IG TPLV LN++ G I K E P+ S+K R M+ DAE + ++ PG ++EPTSGN GI++A++AA +GYK+ LTMP S+ERR ++A GA+L+ Sbjct: 2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 112
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 361 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 + I D S IG TPLV LN++ G I K E P+ S+K R M+ DAE + ++ PG ++EPTSGN GI++A++AA +GYK+ LTMP S+ERR ++A GA+L+ Sbjct: 2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 112
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 361 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 + I D S IG TPLV LN++ G I K E P+ S+K R M+ DAE + ++ PG ++EPTSGN GI++A++AA +GYK+ LTMP S+ERR ++A GA+L+ Sbjct: 2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 112
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 361 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 + I D S IG TPLV LN++ G I K E P+ S+K R M+ DAE + ++ PG ++EPTSGN GI++A++AA +GYK+ LTMP S+ERR ++A GA+L+ Sbjct: 2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 112
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18 Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 343 PKDLPATNIKRDVSQLIGRTPLVFLNKVSE--GCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 PK LP D+ + IG TP+V +NK+ + G + K E F S+KDR ++ M+EDAE + PG T IIEPTSGN GI +A AA++GY+ ++ MP S E+ +RA GA+++ Sbjct: 74 PKILP------DILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIV 189
BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 343 PKDLPATNIKRDVSQLIGRTPLVFLNKVSE--GCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLI 705 PK LP D+ + IG TP++ +NK+ + G + K E F S+KDR ++ M+EDAE + PG T IIEPTSGN GI +A AA++GY+ ++ MP S E+ +RA GA+++ Sbjct: 74 PKILP------DILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDT-IIEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIV 189 The following BLAST results are available for this feature:
BLAST of FC930531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930531 ID=FC930531; Name=FC930531; organism=Citrus clementina; type=EST; length=716bpback to top |