FC930531

Overview
NameFC930531
Unique NameFC930531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930531 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 1 
Query:  361 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAD 699
            + I   + + +G TPL+ +  +SE  G  I  K E   P  S KDR A  ++ D E K L+  G +TI+E T+G+ GIS+  +   +GY + L +P   S E+   +   GA+
Sbjct:   36 SGISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKG-STIVEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAE 147
The following BLAST results are available for this feature:
BLAST of FC930531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CYSK_DICDI1.027e-1133.63Cysteine synthase OS=Dictyostelium discoideum GN=c... [more]

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Properties
Property NameValue
Genbank descriptionC34008E09EF PostHarvC1 Citrus clementina cDNA clone C34008E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930531 ID=FC930531; Name=FC930531; organism=Citrus clementina; type=EST; length=716bp
GGTTAAAACAAAGAAATTAGTATAAAAGGGGGGCTCCGGATTCTGTGACC
ACCACGCACCTTCTACATACTACCATCACCACACTCAGAGCCTTAATTTG
TTATCCGCTGCAAGTGCTGGTGGAAGTGGGAGTGGTTCTTGTAAAGAGTG
AATTATTATTTTTGCTCAAATTTAAAGTTCCTCCTCCAACCTCCATTATT
ATTAAAAATGGCTGCTGCTTTGAGGAGTTTCTTGAAGAAAAGAGCCTTAA
CATGCAGCGAACCCATGTTGATGAGAAGACTGGTCTCCTCACAGCCGGCG
CCGGTTGATTCTTCATCTTTTGCTCAGAGACTCAGAGATTTGCCCAAGGA
TCTTCCAGCTACCAACATCAAGAGAGATGTTTCCCAGCTCATTGGAAGAA
CCCCGCTTGTGTTTCTTAACAAAGTCAGTGAAGGATGTGGAGCTTATATT
GCTGTCAAGCAAGAAATGTTCCAACCCACTGCTAGCATCAAGGACAGACC
AGCAGTGGCCATGCTCGAAGATGCAGAAAATAAAAACTTAATTTCTCCCG
GAAAGACCACTATCATAGAGCCCACGTCAGGGAACATGGGAATAAGCATG
GCGTTTATGGCAGCAATGAAAGGGTATAAGATGGTTCTAACTATGCCCTC
TTATACAAGCTTGGAGAGGAGAGTGACAATGAGAGCATTTGGAGCTGATT
TAATCTCACAGATCCA
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