FC930534
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 60/158 (37.97%), Postives = 97/158 (61.39%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 VTE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 63 VTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 218 HSP 2 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 50/169 (29.59%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+D +V ++ F FG I T+ + RD + G SRGFGF+++ + +++ AA++ MN + + +++ V A KK + E Sbjct: 151 IDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316 HSP 3 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 63/282 (22.34%), Postives = 111/282 (39.36%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDT----------------------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--------RHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVP 682 +VT+E ++F + G + + + +D+ +G+GFV F + + A A+ +N ++ G+ + V +A + +K S G NL++ NL DVD++ L + FS FG I T+ K+MRD T G S+GFGF+ + S + + A+ MN + + + + V+ A +KD + R+ ++ AA +P + G A Q G P P Sbjct: 243 EVTDEEFRKMFEKFGEITSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI-TSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPAGQRGGMPFAPQP 522
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 60/158 (37.97%), Postives = 97/158 (61.39%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 VTE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 62 VTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 217 HSP 2 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 55/169 (32.54%), Postives = 95/169 (56.21%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DPDV E+ F FG I T+ + RDP+ G SRGFGF++Y + E++ AA++ M+ + + +++ V A KK + E Sbjct: 150 IDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI-TSATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREE 315
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 57/154 (37.01%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 511 VTE +L+E F AGP++++ V +D T Y ++ F+ DA+ A+ +N + G+PIR+ + +D G N+FI NLD +D K L DTFSAFG I++ + D SRG+GF+ +++ EA++ AI+ MNG L +R++ V + Sbjct: 22 VTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC---DEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH 172 HSP 2 Score: 84.3445 bits (207), Expect = 7.037e-16 Identity = 56/164 (34.15%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 + + L++ F G +++ V D + +GYGFV F + E A+ AI+ +N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG ++ K+M D D+G SRGFGF++Y + E + A+ MNG+ + R I V A K+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLS-VKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269 HSP 3 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 49/175 (28.00%), Postives = 91/175 (52.00%), Query Frame = 2 Query: 59 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 532 ++ L E+F G ++V V D + +G+GFV + + E+A A+ +N ++ G+ I V +A Q++ + G NL++ NLD +D+ L F +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 204 DKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 60/154 (38.96%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 511 VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN + G+ R+ + +D G N+FI NLD +D K L DTF+AFG I+ + K+ D + G SRGF F+ Y + EA+DAAI+A+NG L ++++ V + Sbjct: 57 VTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDIL-SCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH 208 HSP 2 Score: 95.1301 bits (235), Expect = 3.987e-19 Identity = 69/234 (29.49%), Postives = 118/234 (50.43%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPV---PPRP 691 +VT+ +L GP ++V + +D + +G+GFV + + E A A+ LN ++ GK + +A S ++K L+ G NL++ NLD + D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + + + V+ A +KD + + A + +Q+++ + +G P +Q G +G P+ PP P Sbjct: 237 EVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQ----------ALESQIAQRAQQRMQYGAGFPGMQ------GYMGQPMYGYPPMP 451
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 55/164 (33.54%), Postives = 99/164 (60.37%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 538 VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+ +N + GKP+R+ + +D G N+F+ NLD ++ K L DT SAFG I++ + D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182 HSP 2 Score: 90.5077 bits (223), Expect = 9.819e-18 Identity = 64/213 (30.05%), Postives = 106/213 (49.77%), Query Frame = 2 Query: 59 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQN 643 +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + +R+ + +Q++ P F + P QN Sbjct: 204 DERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQN 412 HSP 3 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 55/164 (33.54%), Postives = 94/164 (57.32%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 + + L++ G +++ V D N +GYGFV F + E A+ AIK +N + L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22 Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 511 VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+ +N L G+PIR+ + +D G N+FI NL+ +D K L DTFS FG I++ D SRGFGF+ +++ EA+ AI MNG L +R++ V + Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172 HSP 2 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 532 V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N ++ G+ + +A QD+ G NL++ NLD +D+ L FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 202 VDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEER 374
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22 Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 538 V E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L DTFS FG I+ + K+ D D G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 63 VNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKIL-SCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 69/235 (29.36%), Postives = 110/235 (46.81%), Query Frame = 2 Query: 41 IFFQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPY 694 I + +EE L +LF G + ++Y+ KD +G+GFV + E A A++ LN ++ G+ I V +A + ++ ++ G NLFI NLD +D + L + F FG I T+ ++M D +TG S+GFGF+ + S E + AI MN + + + V+ A +KD R ++I A N +QNA G G +PP Y Sbjct: 240 IDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKDV---RRSQLEQQIQARNQ----------------MRMQNAAATGGIPGQFIPPMFY 452
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22 Identity = 61/164 (37.20%), Postives = 100/164 (60.98%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 538 VTE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + G+P R+ + +D G N+FI NLD +D K L DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD + + Sbjct: 66 VTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227 HSP 2 Score: 82.8037 bits (203), Expect = 2.047e-15 Identity = 54/169 (31.95%), Postives = 91/169 (53.85%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L + F G +++ V +D N +GYGFV + + E A AIK +N + L K + V K + K ++ AN +++ N+D D E+ D F FG I T+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E Sbjct: 154 IDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-TSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREE 320
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22 Identity = 59/172 (34.30%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER 562 +VTE L++LF VV+V V +D+ GY ++ F + DA A++ LN L+ +PIR+ +++D + L N+FI NLD +D K L +TFS+FG I++ K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP R Sbjct: 59 KVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSC-KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227 HSP 2 Score: 85.8853 bits (211), Expect = 2.419e-16 Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L+E F G +++ V D VT +GYGFV+F EE A AI LN + + K + R +A + N+++ NL ++ E L TF FGVI ++ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E Sbjct: 147 IDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-SSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREE 312 HSP 3 Score: 77.7962 bits (190), Expect = 6.586e-14 Identity = 67/235 (28.51%), Postives = 112/235 (47.66%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANG 703 ++ E+ L + F + G + + V +D+ N + +GFV F E A A++ +N I L + R K S+ ++ L GANL++ NLD VD++ L + FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A +K+ + H + A P S P GPP Q ++ VP +P G Sbjct: 239 EIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR-RAHLQALFSQIRAPGPMSGFHHPPGGPMPGPPQHMYVGQNGASM---VPSQPIGYG 466
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 538 V E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 63 VNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17 Identity = 69/234 (29.49%), Postives = 110/234 (47.01%), Query Frame = 2 Query: 56 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQA----NGTVGGPVP-PRP 691 +EE +LF G + ++Y+ KD+ +G+GFV F E A A++ LN ++ G+ I V +A + ++ L+ G NLF+ NLD +D + L + F FG I T+ K+M D + G S+GFGF+ + + E + AI MN + + + + V+ A +KD R ++I A N Q + L P + Q NG P P P P Sbjct: 245 SEESFEKLFSPFGKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTI-TSAKVMVD-EAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAAGGLPGQFIPPMFYGQQGFFPPNGRGNAPYPGPNP 472 The following BLAST results are available for this feature:
BLAST of FC930534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930534 ID=FC930534; Name=FC930534; organism=Citrus clementina; type=EST; length=724bpback to top |