FC930534
Overview
Analyses
This EST is derived from or has results from the following analyses
Libraries
Homology
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 538 V E LL+E+F G V ++ V +D VT GY +V F D AI+ LN + G+P R+ + +D G N+FI NL P +D K L DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + K+D + + Sbjct: 69 VNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRIL-SCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230 HSP 2 Score: 93.9745 bits (232), Expect = 8.881e-19 Identity = 71/232 (30.60%), Postives = 111/232 (47.84%), Query Frame = 2 Query: 74 ELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASXP 718 E+F GPV +V++ D+ +G+GFV F + E A A+K +N ++ G+ + V +A + ++ LD G NLF+ NLD +D + L + F FG I T+ ++M D D G S+GFGF+ + S E + AI MN + + + + V+ A +KD R ++I A N Q + A+G P +P G G PP G A P Sbjct: 257 EIFKPFGPVTSVHLETDQ-EGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTI-TSARVMVD-DAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAA----AAGMPGQFMSPMFYGQQPGFFPPN--GRGGAQGP 476
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21 Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 505 V+E L+++F G V ++ V +D +T GY +V F + A AI+ LN + GK R+ + +D GA N+FI NL PD+D K L DTFS FG I+++ K+ D +TG S+GFG++ ++ E++ AI+A+NG L ++I V Sbjct: 46 VSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS-KVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV 195 HSP 2 Score: 82.8037 bits (203), Expect = 2.047e-15 Identity = 62/202 (30.69%), Postives = 99/202 (49.01%), Query Frame = 2 Query: 140 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQK--SRPHTLFASGPPSLQNAPQANGTVGGPVPPR 688 ++G+GFV F + EDA ++ LN + G+P+ VN+A + +K + G NLFI NLD +D+K L + F+ +G I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V+ A +KD R A++I A N Q+ + A+G P P G +PPR Sbjct: 255 NKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTI-TSAKVM-TTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQMRFQQASAAAAAAAAAGMPGQFMPPMFYGV----MPPR 447
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 58/170 (34.12%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 559 V E L++ F AGPV+++ V +D +T GY +V F+ DA+ A+ +N + KPIR+ + +D G N+FI NLD +D K + DTFSAFG I+ + K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V + + + G A+ Sbjct: 13 VNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL-SCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAK 180 HSP 2 Score: 79.337 bits (194), Expect = 2.264e-14 Identity = 54/165 (32.73%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC-NRQITVSYAYKK 523 + + +++ F G +++ V D N +GYGFV F +EE A+ +I +N + L GK + V K + +K L A LF + N D D++ L + F +G I T+ K+M D G S+GFGF+++++ EA++AA++A+NG+ + + + V+ A KK Sbjct: 101 IDNKAIYDTFSAFGNILSCKVATDEKGN-SKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI-TSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262 HSP 3 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 49/176 (27.84%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 59 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKL-YGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 532 +E L E F G + + Y + +G+GFV F + E A+ A++ LN + GK + V +A Q + G NL++ NLD +D+ L FS +G I T+ K+M D + G S+GFGF+ +++ + A+ +NG+ + ++ + V+ A +K+ + Sbjct: 196 DEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNI-TSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEER 368
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 58/158 (36.71%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 VTE +L+ELF G V ++ V +D VT GY +V + + A+ LN + GKP R+ + +D G N+FI NLD +D K L DTF+AFG I+ + K+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 53 VTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 208 HSP 2 Score: 82.0333 bits (201), Expect = 3.492e-15 Identity = 52/169 (30.77%), Postives = 96/169 (56.80%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E Sbjct: 141 IDNKALHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-TSATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 58/161 (36.02%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 532 V E L +LF Q PV N+ V +D +T+ GY +V F + EDA A++ LN + +PIR+ +++D + L N+FI NLD +D K L +TFS+FG I+ + K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ + Sbjct: 56 VNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTIL-SCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213 HSP 2 Score: 80.4925 bits (197), Expect = 1.016e-14 Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 538 + + L+E F G +++ V D V +GYGFV+F EE A AI LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I ++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E Sbjct: 143 IDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI-SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE 308 HSP 3 Score: 75.8702 bits (185), Expect = 2.503e-13 Identity = 71/243 (29.22%), Postives = 117/243 (48.15%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLD--------------VGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP------HTLFASGPPSLQNAPQANGTVG-GPVPPRPYANG 703 ++T++ L + F + G + + V KD+ N + +GFV F S E A A++ +N I L G+ + R K S ++ L G+NL++ NLD V+++ L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V+ A +K+ ER +P + P H GP S + P G G G VP +P G Sbjct: 235 EITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKE---ERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYG 470
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 55/166 (33.13%), Postives = 95/166 (57.23%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 541 +VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++ LN + G+P+R+ + +D G N+FI NL +D K L + FSAFG I++ D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER Sbjct: 12 EVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVAC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 174
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 58/160 (36.25%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 526 +TE LL+++F GP+ ++ V +D VT GY +V + E AI+ LN ++ G+P R+ + +D G+ N+FI NL P +D K L +TFS FG ++ + K+ D + GNSRGFGF+ + + AIEA+NG + ++ V+ + KKD Sbjct: 61 ITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVL-SCKVALD-ENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKD 218 HSP 2 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNP--SSQKSRPHTLFASGPPSLQNAPQANGTVGGP---VPPRPYANG 703 + T+E +LF Q G +V+ + KD +G+GFV F A A++ LN + + + V +A + +K + G NLFI NLD +D++ L + F+ +G I T+ ++MRD + GNS+GFGF+ + S E + A+ N Q + + + V+ A +KD R A++I A N Q+ + A+G P Q PQ V P P P NG Sbjct: 241 ETTDEEFEQLFSQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTI-TSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQIRFQQQQQQQAAAAAAGMPG-QYMPQMFYGVMAPRGFPGPNPGMNG 473
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPAE 559 VTE+LL+ F GPV+++ + +D+VT GY +V F DA A+ +N + GK IR+ + +D G N+FI NLD +D K L + FSAFG I+++ K+M D D G S+G+ F+ + + A+D AIE MNG+ L ++ V + +KD + E +E Sbjct: 21 VTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSS-KVMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASE 188 HSP 2 Score: 78.9518 bits (193), Expect = 2.956e-14 Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 523 + + L+E F G +++ V D + +GY FV F+++ AD AI+ +N L G + R ++ ++ + N++I N D+D++ L D FS +G ++ K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + I V A KK Sbjct: 109 IDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLS-VKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 268 HSP 3 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 51/171 (29.82%), Postives = 91/171 (53.22%), Query Frame = 2 Query: 59 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 520 +E L ++F + G ++V V D + +G+GFV F S E A A++ +N + G+ I V +A + K+ + G L+I NLD +D++ L + FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ ++++ A + Sbjct: 203 DERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 369
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 72/231 (31.17%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 50 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPS-SQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPR 688 + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN +L G+ + V +A + + + V G NLF+ NLD VD++ L + F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A +KD R A++I A N Q + A+G P P G +PPR Sbjct: 229 ETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTI-TSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQMRYQQATAAAAAAAAGMPGQFMPPMFYGV----MPPR 449 HSP 2 Score: 97.0561 bits (240), Expect = 1.049e-19 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 508 V+E L+++F G V ++ V +D +T GY +V F E AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K L DTFS FG I+++ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ Sbjct: 49 VSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSS-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 HSP 3 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 47/167 (28.14%), Postives = 86/167 (51.50%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 532 + + L++ F G +++ + D +G+GFV F E A AI LN + L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+ + +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ + Sbjct: 137 IDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS-ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
BLAST of FC930534 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 505 VTE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L NRQ+ V Sbjct: 29 VTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177 HSP 2 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 49/169 (28.99%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 53 VTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLCDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 508 + +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + ++ + V+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 The following BLAST results are available for this feature:
BLAST of FC930534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930534 ID=FC930534; Name=FC930534; organism=Citrus clementina; type=EST; length=724bpback to top |