FC930544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_RICBR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=sucD PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.851e-44 Identity = 88/140 (62.86%), Postives = 105/140 (75.00%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 A+ V+K T+VICQG TG GTFH+EQAI YGTKMVGGVTP KGG HL LP++N+V EAKA+T ANASVIYVPPPF +++VVCITEGIP DMVRVK AL S+TRLIGPNCPGII ++C++ + G Sbjct: 2 AILVNKKTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGKTHLDLPIYNTVHEAKAKTGANASVIYVPPPFAADSILEAIDAGIEIVVCITEGIPVLDMVRVKRAL-VGSRTRLIGPNCPGIITPDECKIGIMPG 140
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_RICTY (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia typhi GN=sucD PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.253e-41 Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DMV+VK AL SKTRLIGPNCPG+I +C++ + G Sbjct: 2 AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKAKTDANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRAL-IGSKTRLIGPNCPGVITPGECKIGIMPG 140
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_COXBU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Coxiella burnetii GN=sucD PE=3 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.637e-41 Identity = 80/140 (57.14%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 ++ +DK TRV+CQG TGK GTFH+EQAIEYGT+MVGGVTP KGG HLGLP+FNSV EA ET A+A++I+VP PF + LVVCITEGIP DM+ VKA L + R+IGPNCPG+I +C++ + G Sbjct: 2 SILIDKETRVLCQGFTGKQGTFHSEQAIEYGTQMVGGVTPGKGGQSHLGLPIFNSVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQHPDVRMIGPNCPGVITPGECKIGIMPG 141
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_RICPR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia prowazekii GN=sucD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.138e-41 Identity = 84/140 (60.00%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DM++VK AL SKTRLIGPNCPG+I +C++ + G Sbjct: 2 AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRAL-IGSKTRLIGPNCPGVITPGECKIGIMPG 140
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_RICFE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis GN=sucD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.138e-41 Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DMV+VK AL SKTRLIGPNCPG+I +C++ + G Sbjct: 2 AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLDLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRAL-VGSKTRLIGPNCPGVITPGECKIGIMPG 140
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCA_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=C05G5.4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.494e-41 Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 269 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 ++K+T+VI QG TGK GTFH +Q +EY TK+VGGV K GTEHLGLPVF +V+EA+ +T A+ASVIYVP + LVVCITEGIPQHDMVRVK+ L +Q+KTRL+GPNCPGII+ ++C++ + G Sbjct: 30 INKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQNKTRLVGPNCPGIISADQCKIGIMPG 166 HSP 2 Score: 23.8682 bits (50), Expect = 2.494e-41 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 661 IGIMPGYIHNLG 696 IGIMPG+IH G Sbjct: 161 IGIMPGHIHKRG 172
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_ECOLI (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli (strain K12) GN=sucD PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 3.255e-41 Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLAL 670 ++ +DKNT+VICQG TG GTFH+EQAI YGTKMVGGVTP KGGT HLGLPVFN+V EA A T A ASVIYVP PF + L++ ITEGIP DM+ VK L+ ++ R+IGPNCPG+I +C++ + Sbjct: 2 SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD-EAGVRMIGPNCPGVITPGECKIGI 137 HSP 2 Score: 26.5646 bits (57), Expect = 3.255e-41 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 646 PGEM*IGIMPGYIHNLG 696 PGE IGI PG+IH G Sbjct: 130 PGECKIGIQPGHIHKPG 146
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_ECOL6 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O6 GN=sucD PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 3.255e-41 Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLAL 670 ++ +DKNT+VICQG TG GTFH+EQAI YGTKMVGGVTP KGGT HLGLPVFN+V EA A T A ASVIYVP PF + L++ ITEGIP DM+ VK L+ ++ R+IGPNCPG+I +C++ + Sbjct: 2 SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD-EAGVRMIGPNCPGVITPGECKIGI 137 HSP 2 Score: 26.5646 bits (57), Expect = 3.255e-41 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 646 PGEM*IGIMPGYIHNLG 696 PGE IGI PG+IH G Sbjct: 130 PGECKIGIQPGHIHKPG 146
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_ECO57 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O157:H7 GN=sucD PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 3.255e-41 Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLAL 670 ++ +DKNT+VICQG TG GTFH+EQAI YGTKMVGGVTP KGGT HLGLPVFN+V EA A T A ASVIYVP PF + L++ ITEGIP DM+ VK L+ ++ R+IGPNCPG+I +C++ + Sbjct: 2 SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD-EAGVRMIGPNCPGVITPGECKIGI 137 HSP 2 Score: 26.5646 bits (57), Expect = 3.255e-41 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 646 PGEM*IGIMPGYIHNLG 696 PGE IGI PG+IH G Sbjct: 130 PGECKIGIQPGHIHKPG 146
BLAST of FC930544 vs. ExPASy Swiss-Prot
Match: SUCD_RICCN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia conorii GN=sucD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.763e-41 Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 260 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIINLEKCRLALCLG 679 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DMV+VK AL SKTRLIGPNCPG+I +C++ + G Sbjct: 2 AILINKKTQVICQGFTGLQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLDLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRAL-VGSKTRLIGPNCPGVITPGECKIGIMPG 140 The following BLAST results are available for this feature:
BLAST of FC930544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930544 ID=FC930544; Name=FC930544; organism=Citrus clementina; type=EST; length=718bpback to top |