FC930545 | Citrus Genome Database

Overview


Name	FC930545
Unique Name	FC930545
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	720

Libraries


Library Name	Type
PostHarvC1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433B_MOUSE (14-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 6.759e-58
Identity = 109/197 (55.33%), Postives = 142/197 (72.08%), Query Frame = 1

Query:   88 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LI ++T  ES VFY KMKGDY+RYL+E    ++++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLELLDKYLILNATQAESKVFYLKMKGDYFRYLSEVASGENKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 6.759e-58
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.149e-57
Identity = 109/197 (55.33%), Postives = 142/197 (72.08%), Query Frame = 1

Query:   88 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  IC+D+L ++D++LI ++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICSDVLELLDKYLILNATHAESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 1.149e-57
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 5.641e-57
Identity = 114/193 (59.07%), Postives = 138/193 (71.50%), Query Frame = 1

Query:  103 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQ 681
            E  V  A+LAEQAERYD+M  AMKKV +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G+E+  +  KEYR +VE EL  IC D+L ++DE LI  + + ES VFY KMKGDYYRYLAE   ++DR    + S K           ++ PTHPIRLGLALNFSVFYYEILN+PE AC LAKQ
Sbjct:    6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEV-ASEDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQ 195

HSP 2 Score: 26.1794 bits (56), Expect = 5.641e-57
Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  681 AFDEAIAELDSLN 719
            AFD+AIAELD+LN
Sbjct:  196 AFDDAIAELDTLN 208

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 216.468 bits (550), Expect = 5.642e-57
Identity = 108/197 (54.82%), Postives = 141/197 (71.57%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSST--SGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQ 681
            +RE  +  ARLAEQAERYD+M  AMK V +L+  L+ E+RNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++++K YR+++E EL  +CND+LS++D+ LI +      ES VFY KMKGDYYRYLAE    + +    + S             ++ PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQ
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQ 199

HSP 2 Score: 26.1794 bits (56), Expect = 5.642e-57
Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  681 AFDEAIAELDSLN 719
            AFD+AIAELD+LN
Sbjct:  200 AFDDAIAELDTLN 212

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_PONAB (14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 5.642e-57
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  D+S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 5.642e-57
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_HUMAN (14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.642e-57
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  D+S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 5.642e-57
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.642e-57
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  D+S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 5.642e-57
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 1.630e-56
Identity = 105/194 (54.12%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 1.630e-56
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.630e-56
Identity = 105/194 (54.12%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 1.630e-56
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

[Close]

BLAST of FC930545 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.630e-56
Identity = 105/194 (54.12%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   97 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 678
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSIEQK +   +++ ++ IK+YR++VE EL  IC  +L ++D++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAK 193

HSP 2 Score: 29.261 bits (64), Expect = 1.630e-56
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  678 TAFDEAIAELDSLN 719
            TAFDEAIAELD+LN
Sbjct:  194 TAFDEAIAELDTLN 207

The following BLAST results are available for this feature:

BLAST of FC930545 vs. ExPASy Swiss-Prot

BLAST of FC930545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142


Match Name	E-value	Identity	Description
1433B_MOUSE	6.759e-58	55.33	14-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab...	[more]
1433B_RAT	1.149e-57	55.33	14-3-3 protein beta/alpha OS=Rattus norvegicus GN=...	[more]
14331_CAEEL	5.641e-57	59.07	14-3-3-like protein 1 OS=Caenorhabditis elegans GN...	[more]
1433F_HUMAN	5.642e-57	54.82	14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S...	[more]
1433T_PONAB	5.642e-57	54.64	14-3-3 protein theta OS=Pongo abelii GN=YWHAQ PE=2...	[more]
1433T_HUMAN	5.642e-57	54.64	14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1...	[more]
1433T_BOVIN	5.642e-57	54.64	14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S...	[more]
1433T_XENLA	1.630e-56	54.12	14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE...	[more]
1433T_RAT	1.630e-56	54.12	14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq...	[more]
1433T_RABIT	1.630e-56	54.12	14-3-3 protein theta OS=Oryctolagus cuniculus GN=Y...	[more]

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Properties


Property Name	Value
Genbank description	C34008F11EF PostHarvC1 Citrus clementina cDNA clone C34008F11, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930545 ID=FC930545; Name=FC930545; organism=Citrus clementina; type=EST; length=720bp
GAAACAAAAAGCAACAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAAGGAA
GAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGA
GAGAGCATCATGTTTACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATAC
GACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACT
GACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGTACAAGAATGTGATTG
GGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCCATTGAACAGAAGGAG
GAGGCCAAGGGTAATGAACAAAATGTGAAGAGGATTAAGGAATATAGGCA
GAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATGATATATTGTCTGTCA
TTGATGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTT
TACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGG
TGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGG
CTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGA
CTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTC
ACCTGAGAGGGCTTGCCACCTGGCTAAACAGCATTTGATGAGGCGATTGC
TGAACTTGATAGCCTTAATG