FC930546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.893e-62 Identity = 115/193 (59.59%), Postives = 153/193 (79.27%), Query Frame = 2 Query: 143 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 R L LV+PF PFLPE+ + +RK+PF++K+++T ++L IFLV SQ+PLYGI S+ +DP W+R+ILA+NRGT+MELGI+PIVTS +++QLL GS++IEV+ ++ DR + QK L I+IA G+A AYV++GMYG LGAG +L+ILQL A +IV+ LDELLQKGYGLGSGISLFIAT CE+I WKA Sbjct: 5 RFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSSDPLLWLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKFLAIIIAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSGISLFIATINCENIFWKA 197
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.258e-57 Identity = 106/193 (54.92%), Postives = 147/193 (76.17%), Query Frame = 2 Query: 143 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 R+L L +PF FLPEV + +RK+P+ +K+I+T +SL IFLV Q+PLYGI S+ G+DP W+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ I++ +G+A+ V++G YGSVS LG ++L+ILQL FA IV+ LDELL KGYGLGSGISLF ATNI E I WKA Sbjct: 4 RLLDLFKPFEAFLPEVIAPERKVPYNQKLIWTAVSLLIFLVLGQIPLYGIVSSEGSDPLQWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQKVCAIVLTLGQAIVVVLTGNYGSVSNLGIAISLLLILQLVFASFIVLLLDELLIKGYGLGSGISLFTATNIAEQIFWKA 196
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.659e-57 Identity = 107/193 (55.44%), Postives = 144/193 (74.61%), Query Frame = 2 Query: 143 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 R+L L +PF FLPEV S +RK+P+ +K+I+T +SL IFLV Q+PLYGI S +DP YW+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V + +EDR L AQK+ I++ G+A+ VM+G YGS S LG ++L+I QL FA IV+ LDELL KGYGLGSGISLF ATNI E+I WKA Sbjct: 4 RILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQKVCAIILTFGQALVVVMTGNYGSPSDLGIAISLLLIFQLMFASFIVLLLDELLTKGYGLGSGISLFTATNIAENIFWKA 196
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.425e-55 Identity = 101/193 (52.33%), Postives = 144/193 (74.61%), Query Frame = 2 Query: 143 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 RVL L +PF FLPEV + +RK+P+ +K+I+T +SL IFL+ Q+PLYGI S+ +DP YW+R +LASNRGT++ELG++PI+TS ++ Q L G++++++ ++DR L AQK+ I++ +G+A+ VM+G YG+ S LG +L+I QL FA +IV+ LDELL KGYGLGSGISLF ATNI E I W+A Sbjct: 5 RVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSETSDPLYWLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQKVCAIILILGQALVVVMTGNYGAPSDLGLPICLLLIFQLMFASLIVMLLDELLSKGYGLGSGISLFTATNIAEQIFWRA 197
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_KLULA (Protein transport protein SEC61 subunit alpha OS=Kluyveromyces lactis GN=SEC61 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.630e-55 Identity = 101/193 (52.33%), Postives = 142/193 (73.58%), Query Frame = 2 Query: 143 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 RVL L +PF +LPEV + +R +P+++K+I+T +SL +FLV Q+PLYGI S+ +DP YW+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ IL+ G+A+ V++G YG S LG ++L+I QL FA V+ LDELL KGYGLGSGISLF ATNI E I WKA Sbjct: 4 RVLDLFKPFEAYLPEVIAPERPVPYKQKLIWTGVSLLVFLVLGQIPLYGIVSSETSDPLYWLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNMENKQDRELYQIAQKVFAILLTFGQAIVVVLTGNYGKPSDLGLAISLLLIFQLIFASFTVLLLDELLSKGYGLGSGISLFTATNIAEQITWKA 196
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33 Identity = 71/183 (38.80%), Postives = 121/183 (66.12%), Query Frame = 2 Query: 176 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 + PEV+ R++P RE+ ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +++ G +G V + A+L+ILQL GI++I LDEL+ K +G+GSGISLFIA + ++I+ ++ Sbjct: 13 WFPEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGGAFGRVGVDVTYAIAVLMILQLAMGGIVLIILDELVSK-WGIGSGISLFIAAGVSQTILTRS 193
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32 Identity = 73/183 (39.89%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 176 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +V+ G +G V + A L+ILQL F GII+I LDEL+ K +G+GSGISLFIA + + I+ ++ Sbjct: 13 WFPEVERPKKHVPLKEKFMWTGLALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFLEAAIWVLGGAFGRVGVDVTYAIAALMILQLAFGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRILTRS 193
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32 Identity = 74/183 (40.44%), Postives = 116/183 (63.39%), Query Frame = 2 Query: 164 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 712 P LP+V+S ++PFREK+ +T I L ++ +Q+PLYG+ S D F R +LA N G+++ LGI PIV++ +++QLL G KI+++D + ED+A G QKLL I+ EA+ +V++ GS++ ++ILQL GI++I LDE++ K +G GSG+ LFIA + + II Sbjct: 10 PLFSVLPQVKSPGYRVPFREKLKWTGIILVLYFFLAQIPLYGL-SANAVDQFAQFRAVLAGNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQKLLAIVFTFFEALIFVLT---GSLAPSAPQFVWVLILQLTIGGILIIFLDEVVSK-WGFGSGVGLFIAAGVSQEII 187
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 77/182 (42.31%), Postives = 119/182 (65.38%), Query Frame = 2 Query: 164 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESI 709 P L +PEV+ ++I F+EK+ +T I L ++ + + +Y + A +W + I AS GT++ LGI PIVT+G++MQLL GS II++D ++ E+RAL G QKLL I++ EAV +V +G +G ++ L A L+I+Q+ F II+I LDE++ K YG+GSGI LFIA + ++I Sbjct: 6 PILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFW-QTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPL---LAFLVIIQIAFGSIILIYLDEIVSK-YGIGSGIGLFIAAGVSQTI 182
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.883e-31 Identity = 70/183 (38.25%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 176 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G+++ LGI PIVT+G+++QLL GS++I +D EDR Q++ + + EA +V+ G +G V + A L+I+QL GII+I LDEL+ K +G+GSGISLFIA + + I+ ++ Sbjct: 13 WFPEVERPKKHVPLKEKFVWTGLALVLYYVLAEIPVYGIPKKI-QDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLLVGSELIRLDLANPEDRRFYQALQRVFSVFMCFFEAAIWVLGGAFGRVGVDVTYTIATLMIIQLALGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRILTRS 193 The following BLAST results are available for this feature:
BLAST of FC930546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930546 ID=FC930546; Name=FC930546; organism=Citrus clementina; type=EST; length=722bpback to top |