FC930546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 70/183 (38.25%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 179 LPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG-ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGN---AILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIW 715 LP V K K+++T I L ++L+ + +PLYG+ S+ F ++I AS++GT+ +LGI P++TSGL+MQ+L GSK+I VD +E ++ A+K L ++ I V S ++G V N I++++QL A I++ LDE++QKG+GLGSG+SLFI I + I W Sbjct: 14 LPAVSKPKDKPTLTRKLLWTFIGLIVYLLMASIPLYGVTSSNSFLSNFLAQQIIFASSQGTLAQLGIGPVITSGLIMQILVGSKLINVDLTTQEGKSKFTQAEKALALIFII------VESSLFGYVFTRATSNILLPIIVVVQLIIASYIILLLDEMIQKGWGLGSGVSLFIMAGIMKVIFW 190
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 70/180 (38.89%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 182 PEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY--GSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIW 715 P V+ +RK ++ +T + L ++ + S +PLYGI R+I AS+ GT+MELGI PIVT+ L++Q+L G+KII++D E R AQK+L + A EAVA+ + G Y G+ + G + L+ LQL ++VI DE++QKG+G+GS ISLFI + + ++W Sbjct: 15 PAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGGQVDLQRIIFASSAGTLMELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVLALAFAALEAVAFTVGGRYWVGTAIEPGPLDYALVSLQLFLGALLVIYFDEVMQKGWGIGSAISLFILAGVAQGVVW 194
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29 Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = 2 Query: 134 GGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIW 715 GG R ++ ++P LPEV+ + EK+ + + ++ + S +P+YG T DP RV+ S+ +M G+ PI S ++Q+LA K I V+ N+ DR L AQK++ L+ + AV YV SG YGS S LG I++ILQ+ GI+ I L E+++KG+GLGSG L + ++I +I+W Sbjct: 2 GGARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDPINNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVSALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGSGPVLLLGSHILGNIMW 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29 Identity = 70/184 (38.04%), Postives = 117/184 (63.59%), Query Frame = 2 Query: 158 VRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESI 709 ++P L +PEV+ + + F+EK+ +T + L ++ + + +Y + A +W + + AS GT++ LGI PIVT+G++MQLL GS++I +D + +RAL G QKL GI + EAV +V +G +G V+ + A++++LQL I+VI LDE++ + YG+GSGI LFIA + ++I Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIYMGGAEMPAMFAFW-QTVTASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLEAVMFVGAGAFGVVN---STLALILVLQLALGAILVIYLDEIVSR-YGIGSGIGLFIAAGVAQTI 181
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29 Identity = 67/182 (36.81%), Postives = 111/182 (60.99%), Query Frame = 2 Query: 176 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAV--AYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIW 715 +LP V K +K++++++++ I+L+ + PLYGI S + ++I AS GT+ +LGI PI+T+GL+MQ+LAGSK+I +D N +DR AQK L + + E+ YV++ +++ A ++I QL A +++ LDEL+QKG+GLGSG+SLFI + + + W Sbjct: 13 YLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNLILEQIIFASTTGTLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAFIFILVESALFGYVLARTSTTINASILFIAGIVIAQLIVATYLILLLDELIQKGWGLGSGVSLFILAGVMKIMFW 194
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 72/197 (36.55%), Postives = 115/197 (58.38%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGA---DPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYG---SVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGI----SLFIATNI 697 GFR++ +V+P LP LPEV+ K+PF +K++YT+ + I+L +Q PL G+ T DP Y++R + T++E G+ P ++SGL++QLLAG K+I+V+ ++ DR L K+ I+ + ++ +G +G SV Q+G LI QL AGI L E++ KG+G SG ++ IATN+ Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLF-AQFPLVGLPKATTPNVNDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGDDLSVVQIG-----LINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIATNL 193
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 65/196 (33.16%), Postives = 112/196 (57.14%), Query Frame = 2 Query: 146 VLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGM----YGSVSQLGAGNAI---LIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 712 V+ ++P+ +P V+ + FREK +T L ++ + S +P++G+ S D F R + A + G+++ LGI PIVT+ +++QLL G+ II++D EDRA Q+ L ++ EA+ + G+ +QLG I LI +QL G++++ +DE++ K +G+GSG+SLFI I +SI+ Sbjct: 4 VIRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAAYRALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVMIAVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFIGGVLIVYMDEVVSK-WGIGSGVSLFILAGIAQSIV 197
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24 Identity = 66/192 (34.38%), Postives = 111/192 (57.81%), Query Frame = 2 Query: 164 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQK-LLGILIAIGEAVAYVMSGMYGSVSQLGA-------GNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 712 P L +P V+ + +PFR K+ +T L ++ + +PL+GI T G D F R +LA +GTV++LGI PIVT+ +V+QLL G+ ++ +D +N D+A+ G QK L+G+++ + A + QL G +LI Q+ GI+++ +DE++ K +G+GSGI LFI + +S++ Sbjct: 9 PVLTRMPAVERPEGHVPFRRKMYWTGGVLVLYFFLTNVPLWGIQ-TAGNDFFGQFRSLLAGGQGTVLQLGIGPIVTASIVLQLLGGANLLGLDTDNDPRDQAIYQGLQKFLVGVMVVLTGAPMVFLGNFLQPSQQLAQSMPGGAFGVEVLIFAQIAAGGILLLFMDEVISK-WGVGSGIGLFIVAGVSQSLV 198
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.992e-22 Identity = 66/194 (34.02%), Postives = 111/194 (57.22%), Query Frame = 2 Query: 164 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKI--IEVDNNVREDRALLNGAQKLL-GILIAIGEAVAYVMSGMYGSVSQ-----LGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 712 P L +P V + +PFR K+ +T L ++ + + L+G+ + T D F R ILA +G+V++LGI PIVT+ +V+QLL G+ + ++ DNN R D+ L G QKLL G++I + + V +G + Q LG G LI Q+ G++++ +DE++ K +G+GSG+ LFI + + ++ Sbjct: 9 PVLSRMPAVARPEGHVPFRRKLGWTGGILVLYFFLTNVTLFGLDAATANDLFGQFRSILAGQQGSVLQLGIGPIVTASIVLQLLGGADLLGLDTDNNPR-DQVLYQGLQKLLVGVMICL-TGLPMVFAGNFLPADQAVATSLGIGTVGVKGLIFAQIAVGGVLILFMDEIVSK-WGVGSGVGLFIIAGVSQQLV 199
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 59/192 (30.73%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 164 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY-----GSVSQLGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 712 P L +P VQ + +PF+ K+ +T L ++ + + L+G+ F ILAS +G++M+LGI PIVT+ +V+QLL G+ ++ ++ + D+ L G QKLL +++ + V +G + + LG G A LI Q+ G++++ +DE++ K +G+GSGI LFI + + ++ Sbjct: 9 PLLVRMPAVQRPEGHVPFKRKLTWTGGVLLLYFFLTNVKLFGLDIDASQQVFGRFSSILASGQGSIMQLGIGPIVTASIVLQLLGGADLLGLNTQDDPRDQILYQGLQKLLVLVMICLTGLPMVFAGGFLPADTAVANSLGIGTAGVQWLIFAQMFVGGVLILFMDEVISK-WGVGSGIGLFIVAGVSQRLV 199 The following BLAST results are available for this feature:
BLAST of FC930546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930546 ID=FC930546; Name=FC930546; organism=Citrus clementina; type=EST; length=722bpback to top |