FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 119/219 (54.34%), Postives = 160/219 (73.06%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 664 +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ A E L+ D++ Sbjct: 220 VLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI-AELEVLNEDQK 437
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHESR (60 kDa chaperonin OS=Shewanella sp. (strain MR-7) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 118/222 (53.15%), Postives = 162/222 (72.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G Sbjct: 220 VLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIADVE--VANEDQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHESM (60 kDa chaperonin OS=Shewanella sp. (strain MR-4) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 118/222 (53.15%), Postives = 162/222 (72.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G Sbjct: 220 VLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIADVE--VANEDQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHESA (60 kDa chaperonin OS=Shewanella sp. (strain ANA-3) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 118/222 (53.15%), Postives = 162/222 (72.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G Sbjct: 220 VLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIADVE--VANEDQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHEPC (60 kDa chaperonin OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 119/219 (54.34%), Postives = 160/219 (73.06%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 664 +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ A E L+ D++ Sbjct: 220 VLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI-AELEVLNEDQK 437
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 119/222 (53.60%), Postives = 161/222 (72.52%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKK++N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+A LTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V ++A+ RVAQIR IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+++ G Sbjct: 220 ILLVDKKVSNIRELLPTLEAVAKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDLATLTGGTVISEEIGLELEKVTLEDLGTAKRVVINKDNTTVVDGAGEEEAIQGRVAQIRAQIEESSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALVRAASKIVDLQG--DNEDQTHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_KLEOR (60 kDa chaperonin (Fragment) OS=Klebsiella ornithinolytica GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 118/222 (53.15%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKK++N R+++ VLE + P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA L+R+++K+ + T N+++ VG Sbjct: 220 ILLADKKVSNIREMLPVLEAVAKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIQGRVAQIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGL--TAQNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ERWAP (60 kDa chaperonin (Fragment) OS=Erwinia aphidicola GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 117/222 (52.70%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGGTVI +E+G+ L+K G E +G A +VV+ KDTT I+ + ++ RV QIR IE A DY+REKL ER+AKL+GGVAV++VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGMELEKAGLEDMGQAKRVVINKDTTIIIDGTGEEATINGRVTQIRQQIEEATSDYDREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKLAELRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_AERHH (60 kDa chaperonin OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=groL PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 116/222 (52.25%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKK++N R+++ VLE + P++I+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVG+ L+K E LG A ++V+TK+ TTI+ + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA L+R+++K+ ++ DN+++ VG Sbjct: 220 ILLVDKKVSNIREMLPVLEGVAKAGKPLIIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGMELEKATLEDLGRAKRIVITKENTTIIDGVGDASLIESRVAQIRQQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGLRG--DNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_YERE8 (60 kDa chaperonin OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=groL PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.899e-59 Identity = 120/222 (54.05%), Postives = 157/222 (70.72%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LT GTVI +E+GL L+K E LG A +VV+ KDTT I+ + A+ RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +S + A DN+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTVISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRAASAITAAGLKGDNEDQNVG 441 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |