FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_THISH (60 kDa chaperonin OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58 Identity = 119/224 (53.12%), Postives = 157/224 (70.09%), Query Frame = 2 Query: 2 CKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 C +LL DKKI+N RDL+ VLE + P+LIIAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGG VI +EVGL+L+K + LG A ++V+TK+ +TI+ D + RV QIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + ++K N ++ +G Sbjct: 218 CFVLLYDKKISNIRDLLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGQVISEEVGLSLEKASLDDLGQAKRIVVTKENSTIIDGAGKPDEIKGRVEQIRAQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQALKSLKGA--NHDQDIG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSEPK (60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58 Identity = 118/222 (53.15%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + + +K DN+++ VG Sbjct: 220 LLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIIDLKG--DNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSEP1 (60 kDa chaperonin OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58 Identity = 118/222 (53.15%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + + +K DN+++ VG Sbjct: 220 LLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIVDLKG--DNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_MARAV (60 kDa chaperonin OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58 Identity = 123/225 (54.67%), Postives = 160/225 (71.11%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSS---KVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ VLE + P+ IIAEDIE EALATLVVN +RG +K+ A+KAPGFG+R+ + L DIAILTGGTVI +EVGL L+ + LG A +V +TK+ TTI+G + +S RV QIR IE++ DY++EKL ER+AKL+GGVAVI+VGA +E E+KEKK RVEDAL++T+AA TL+R + KVDAI NDE+K G Sbjct: 220 ILLVDKKISNIRELLPVLEAVAKAGKPLQIIAEDIEGEALATLVVNNMRGIVKVNAVKAPGFGDRRKEMLQDIAILTGGTVISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDYDKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLIRAIAALDKVDAI-----NDEQKAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSEE4 (60 kDa chaperonin OS=Pseudomonas entomophila (strain L48) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.994e-58 Identity = 119/222 (53.60%), Postives = 155/222 (69.82%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + + +K DN+E+ VG Sbjct: 220 LLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADGDIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIADLKG--DNEEQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_HAEDU (60 kDa chaperonin OS=Haemophilus ducreyi GN=groL PE=3 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 4.994e-58 Identity = 119/222 (53.60%), Postives = 159/222 (71.62%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 ++LVDKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILT GTVI +E+G+ L+K E LG A +VV+TKD TTI+ + + RV QIR IE++ DY++EKL ER+AKL+GGVAVI+VGA TE +KEKK RV+DAL+AT+AA L+R ++KV A T DN+E+ VG Sbjct: 220 IILVDKKISNIREILPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVITKDNTTIIDGIGDEAQIKARVVQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALVRAANKVSATL-TGDNEEQNVG 440
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_AGGAC (60 kDa chaperonin OS=Aggregatibacter actinomycetemcomitans GN=groL PE=1 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 4.994e-58 Identity = 118/222 (53.15%), Postives = 158/222 (71.17%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILT GTVI +E+G+ L+K E LG A ++V+ KD TTI+ + + RVAQIR IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + +V ++ +N+E+ VG Sbjct: 220 ILLVDKKISNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEDLGQAKRIVINKDNTTIIDGIGDEAQIQGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAAGRVVGLQG--ENEEQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SYMTH (60 kDa chaperonin OS=Symbiobacterium thermophilum GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.523e-58 Identity = 117/222 (52.70%), Postives = 158/222 (71.17%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +L+ DKKI+ +DL+ +LE ++ P+LIIAED+E EALATLVVNKLRG L++AA+KAPGFG+R+ L+DIAILTGG V+ +E+G L+ E+LG A +V + K+ TTI+ + +A+ RVA I+ IE D++REKL ER+AKL+GGVAVI+VGA TE ELKEKKLR+EDALNAT+AA LL+ +D + +TL+ D EKVG Sbjct: 220 ILITDKKISAVQDLLPILEKVVQRGKPLLIIAEDVEGEALATLVVNKLRGTLQVAAVKAPGFGDRRKAMLEDIAILTGGEVVSEELGRKLENATIEMLGQARQVRIEKEKTTIIDGAGSSEAIKNRVAAIKRQIEETTSDFDREKLQERLAKLAGGVAVIKVGAATEVELKEKKLRIEDALNATRAAVEEGIVAGGGVALLQTQKAIDELIKTLEGD-EKVG 440
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SODGM (60 kDa chaperonin OS=Sodalis glossinidius (strain morsitans) GN=groL PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.523e-58 Identity = 117/222 (52.70%), Postives = 158/222 (71.17%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +KIAA+KAPGFG+R+ L DIAILT GTVI +E+GL L+K E +G A +VV+TKDTTTI+ + + RV QI + A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R+++++ ++ DN+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKIAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGLELEKATLEDMGQAKRVVITKDTTTIIDGEGDKALIDSRVTQINQQRDEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVANRIAELRG--DNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSEPW (60 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.523e-58 Identity = 122/223 (54.71%), Postives = 160/223 (71.75%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDA-VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL L+ E LGNA +V+L+K+ TTI+ DG+ DA + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R + + +K DN+++ VG Sbjct: 220 LLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLTLETTTLEHLGNAKRVILSKENTTII-DGAGVDADIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIVDLKG--DNEDQNVG 439 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |