FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALPK (60 kDa chaperonin OS=Salmonella paratyphi A (strain AKU_12601) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALPC (60 kDa chaperonin OS=Salmonella paratyphi C (strain RKS4594) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALPB (60 kDa chaperonin OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALPA (60 kDa chaperonin OS=Salmonella paratyphi A GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALHS (60 kDa chaperonin OS=Salmonella heidelberg (strain SL476) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALEP (60 kDa chaperonin OS=Salmonella enteritidis PT4 (strain P125109) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALDC (60 kDa chaperonin OS=Salmonella dublin (strain CT_02021853) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALCH (60 kDa chaperonin OS=Salmonella choleraesuis GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALAR (60 kDa chaperonin OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SALA4 (60 kDa chaperonin OS=Salmonella agona (strain SL483) GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.086e-60 Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIADLKG--QNEDQNVG 439 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |