FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_SYNFM (60 kDa chaperonin 1 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=groL1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.320e-55 Identity = 118/219 (53.88%), Postives = 148/219 (67.58%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 664 +L+ +KKI+N +DL+ VLE + P+LIIAED+E EALATLVVNKLRG L + A+KAPGFG+R+ LDDIAILTGG VI +E G+ L+ VG LG A + + KD TTIV + A+ RV QIRT I+ DY+REKL ER+AK+ GGVAVI VGA TETE+KEKK RVEDALNAT+AA LR + A+ L+ DE+ Sbjct: 219 ILINEKKISNMKDLLPVLEQIAKMGRPLLIIAEDVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLDDIAILTGGQVISEEKGIKLESVGLNDLGKAKTIRIDKDNTTIVDGAGDRKALEGRVRQIRTQIDETTSDYDREKLQERLAKMVGGVAVISVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYLRCLGALGAV--NLEGDEK 435
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_RHISN (60 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR234) GN=groL1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.320e-55 Identity = 115/222 (51.80%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 LL+ +KK++N + L+ VLE ++ P+LIIAED+E EALAT VVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGT I +++G+ L+ V +LG A KVV+ K+ TTIV ++ + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR +D+I+ +N ++K G Sbjct: 220 LLIHEKKLSNLQALLPVLESVVQSGKPLLIIAEDVEGEALATPVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTAISEDLGIKLENVTLNMLGRAKKVVVEKENTTIVDGAGSKSEIQGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAVKALDSIR--TENADQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_AZOSB (60 kDa chaperonin 1 OS=Azoarcus sp. (strain BH72) GN=groL1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.320e-55 Identity = 116/222 (52.25%), Postives = 149/222 (67.12%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N RDL+ VLE + P+LIIAED++ EALATLVVN +RG LK A+KAPGFG+R+ L+DIAILTGG VI +EVGL L+K + LG A ++ + K+ T I+ + RV QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR + + +K DN ++ G Sbjct: 220 VLLFDKKISNIRDLLPVLEQVAKAGRPLLIIAEDVDGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQVIAEEVGLTLEKATLQDLGQAKRIEIGKENTIIIDGAGEASRIEARVKQIRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARASLAGLKG--DNHDQDAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 117/222 (52.70%), Postives = 152/222 (68.47%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +L+ DKK++ + LI VLE + PIL+IAED+E EAL TLV+NKL+G L A+KAPGFG+R+ L DIAILTGGTVI DE+G+ L+ V E LG A V + KD T I+G + + KR+AQI++ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TL+R V+ + + LD D EKVG Sbjct: 218 ILITDKKLSAVKPLIPVLEKVAQTGKPILVIAEDVEGEALTTLVLNKLKGTLSACAVKAPGFGDRRKAMLQDIAILTGGTVISDELGINLEDVAIEDLGRADIVRVKKDDTIIIGGKGNPEEIKKRIAQIKSQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKELDGD-EKVG 438
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SULNB (60 kDa chaperonin OS=Sulfurovum sp. (strain NBC37-1) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 117/218 (53.67%), Postives = 153/218 (70.18%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDE 661 +L+ D KIT+ +DLI VLE + P+LII++D+E EALATLV+N+L+G L IAA+KAPGFG+RK + L DIAILTG VI +E+GL+LDK + LG A +VV+ KD T IV AV RVA+I+ +EN +Y++EKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+ATKAA L + S A+K L++DE Sbjct: 219 ILITDSKITSLKDLIPVLEQIQQSGRPLLIISDDLEGEALATLVLNRLKGVLNIAAVKAPGFGDRKKEMLKDIAILTGANVITEELGLSLDKATLDDLGQAGRVVIDKDNTVIVDGKGDSAAVDARVAEIKIQVENTTSEYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVDEGIVIGGGAALAKASK---AVKLDLEHDE 433
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 113/209 (54.07%), Postives = 152/209 (72.73%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDA 634 +LL +KK++N + L+ VLE ++ + P++IIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGG VI +++G+ L+ V ++LG A KV ++K+ TTIV + + RV+QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DALNAT+AA LLR S+K+ A Sbjct: 220 ILLHEKKLSNLQALLPVLEAVVQTSKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLETVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVSQIKQQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASAKISA 428
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 112/222 (50.45%), Postives = 157/222 (70.72%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL +KK+++ + ++ +LE I+ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG+A +V +TKD TTIV + + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ + +D ++ N+++ +G Sbjct: 220 ILLHEKKLSSLQPMVPLLESVIQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTIDMLGSAKRVSITKDETTIVDGAGAKAEIEARVAQIRNQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAAKHLDGLEGA--NNDQNIG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 114/222 (51.35%), Postives = 150/222 (67.57%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +L+ DKKI+N ++L+ +LE + + P+LIIAEDIE EALATLVVNKLRG LK+ A+KAPGFG+R+ L+DIAILTGGTVI +E G L+ LG A V L KD TT+V DA+ R+ +I+ IE + DY+ EKL ER+AKLSGGVAVI +GA TE E+KEKK RVEDAL+AT+AA L+R ++ DN+++K+G Sbjct: 220 ILIYDKKISNMKELLPILEKSAQSGRPLLIIAEDIEGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATLSYLGQAGSVSLDKDNTTLVEGKGASDAIKARINEIKGQIEKSTSDYDTEKLQERLAKLSGGVAVINIGASTEVEMKEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLN--NAQADNEDQKIG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 628 +LL DKKI N +DL+ +LE + P+LIIAEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ + LG AS V++ KD TTIV + ++ R+ QI+ I DY+REKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+ATKAA L++ SK+ Sbjct: 219 ILLFDKKIANLKDLLPILEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESASIQDLGQASSVIIDKDNTTIVNGAGEKANINARINQIKAQIAETSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKSKI 425
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_CAMC1 (60 kDa chaperonin OS=Campylobacter concisus (strain 13826) GN=groL PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 116/208 (55.77%), Postives = 144/208 (69.23%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVD 631 +LL DKKITN +DL+ VLE + P+LIIAEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ LG AS VV+ KD TTIV + A+ R+ QI+ I DY++EKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+AT+AA L+ S V+ Sbjct: 219 ILLFDKKITNLKDLLPVLEQVQKSGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESATINDLGQASSVVIDKDNTTIVNGAGEKSAIDARITQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVVGGGSALILASKSVN 426 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |