FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.168e-55 Identity = 114/222 (51.35%), Postives = 152/222 (68.47%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL +KK++ + ++ VLE ++ P+LIIAED+E EALATLVVN+LRG LK++A+KAPGFG+R+ L+DIAILTGG +I +E+G+ L+ V ++LG A KVV+ K+ TTIVG + + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RVEDALNAT+AA LLR V I DN + + G Sbjct: 220 ILLHEKKVSGLQSMLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVSAVKAPGFGDRRKAMLEDIAILTGGQLISEEIGIKLESVTLKMLGRAKKVVIDKENTTIVGGAGKKPDIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHN--DNADVQAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_PROM1 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL1A) GN=groL1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.168e-55 Identity = 110/219 (50.23%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 664 +L+ DKKI++ DLI VLE + P++I+AE++E EALATLVVNK RG L++AA++AP FGER+ L DIA+LTGGT+I ++ ++L+KV LG A +V +TKD+TTIV + + +S R+A I+ ++ + +Y++EKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL LS + + + L+ D++ Sbjct: 218 ILITDKKISSIADLIPVLETVQKNGTPLIILAEEVEGEALATLVVNKNRGVLQVAAVRAPSFGERRKAALGDIAVLTGGTLISEDKAMSLEKVQISDLGQARRVTITKDSTTIVANDNQNTELSNRIASIKRELDETDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLEGDQK 436
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_CORJK (60 kDa chaperonin 1 OS=Corynebacterium jeikeium (strain K411) GN=groL1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.168e-55 Identity = 113/208 (54.33%), Postives = 147/208 (70.67%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVD 631 +LLV KI+N +DL+ +LE ++ P+LI+AEDIE EAL+TLVVNK+RG K A+KAPGFG+R+ L DIAILTGG VI +EVGL+L+ +LG A KVV+TKD TTIV + + ++ R+ QIR IENA+ DY+ EKL ER+AKLSGGVAV+QVGA TE ELKE+K R+EDA+ KAA LL+ +S +D Sbjct: 223 ILLVSSKISNVKDLLPLLEKVMQSGKPLLIVAEDIEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIAEEVGLSLETADLPMLGTARKVVVTKDDTTIVDGAGSAEQLAGRIKQIRQEIENADSDYDAEKLQERLAKLSGGVAVLQVGAATEVELKERKHRIEDAVRNAKAAAEEGIVAGGGAALLQTASVLD 430
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_XYLFM (60 kDa chaperonin OS=Xylella fastidiosa (strain M12) GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 110/211 (52.13%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 640 +LL DKKI+N RDL+ VL+ + + +LI+AE++E EALATLVVN +RG +K+ A+KAPGFG+R+ L+D+A+LTGGTVI +EVGL+L+K LG A KV ++K+ TTI+ DA++ RV QI+T IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL AT+AA L+R+ + + +K Sbjct: 220 ILLHDKKISNVRDLLTVLDAVAKESKQLLIVAEEVEGEALATLVVNNIRGIIKVCAVKAPGFGDRRKAMLEDMAVLTGGTVISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGMGDNDAINGRVKQIKTQIEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAVEEGVIPGGGVALIRVITAISNLK 430
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_XYLFA (60 kDa chaperonin OS=Xylella fastidiosa GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 110/211 (52.13%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 640 +LL DKKI++ RDL+ VL+ + + P+LI+AE++E EALATLVVN +RG +K+ A+KAPGFG+R+ L+D+A+LTGGTVI +EVGL+L+K LG A KV ++K+ TTI+ DA++ RV QI+T IE DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL AT+AA L+R + + +K Sbjct: 220 ILLHDKKISSVRDLLTVLDAVAKESKPLLIVAEEVEGEALATLVVNNIRGIIKVCAVKAPGFGDRRKAMLEDMAVLTGGTVISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGIGDNDAINGRVKQIKTQIEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAVEEGVIPGGGVALIRAITAISNLK 430
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 114/217 (52.53%), Postives = 147/217 (67.74%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDND 658 +L+ DKK++N +DL+ +LE ++ +LIIA+D+E EALATLVVNKLRG A+KAPGFG+R+ + L DIAILTGG VI +E+G L V ++LG A +V +TK+ TTIVG + KRV QI+ IE DY+REKL ER+AKL+GGVAVIQ GA TETELKEKK R+EDAL ATKAA LL + V + ++LD D Sbjct: 218 ILITDKKLSNIQDLLPLLEQVVQHGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGD 434
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 114/217 (52.53%), Postives = 147/217 (67.74%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDND 658 +L+ DKK++N +DL+ +LE ++ +LIIA+D+E EALATLVVNKLRG A+KAPGFG+R+ + L DIAILTGG VI +E+G L V ++LG A +V +TK+ TTIVG + KRV QI+ IE DY+REKL ER+AKL+GGVAVIQ GA TETELKEKK R+EDAL ATKAA LL + V + ++LD D Sbjct: 218 ILITDKKLSNIQDLLPLLEQVVQHGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGD 434
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 111/218 (50.92%), Postives = 151/218 (69.27%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDE 661 +L+ ++KI+N +DL+ +L ++ P+LIIAED+E EALATL+VNKLRG + A+KAPGFG+R+ + ++DIAILTGG VI +E+GL L+ LG A KVV+TKD TTIV + + R+ QI+ +E + D++REKL ER+AKL+GGVAVI+VGA TETELKEKK RVEDAL+AT+AA LL+ V + + LD DE Sbjct: 219 ILIANQKISNVQDLLPLLNQVMQANKPLLIIAEDVEGEALATLIVNKLRGTFQSCAVKAPGFGDRRKRMMEDIAILTGGEVITEELGLKLENTQLSQLGRARKVVVTKDDTTIVDGAGDPEQIKGRINQIKAELETTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGDE 436
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 114/208 (54.81%), Postives = 147/208 (70.67%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVD 631 +LL DKKI+N RDL+ VLE + + P+LIIAED+E EALATLVVN +RG LK A+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+K + LG A ++ + K+ TTI+ + RVA+IR IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR + ++ Sbjct: 220 VLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALE 427
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 114/208 (54.81%), Postives = 147/208 (70.67%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVD 631 +LL DKKI+N RDL+ VLE + + P+LIIAED+E EALATLVVN +RG LK A+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+K + LG A ++ + K+ TTI+ + RVA+IR IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR + ++ Sbjct: 220 VLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALE 427 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |