FC930549

Overview
NameFC930549
Unique NameFC930549
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACCZ (60 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACCE (60 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G G+TQ  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGIGNTQQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACC7 (60 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACC3 (60 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACC1 (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groL PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACC0 (60 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_BACAH (60 kDa chaperonin OS=Bacillus thuringiensis (strain Al Hakam) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 113/211 (53.55%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 637
            +L+ DKKI+N ++++ VLE  ++   P+LIIAED+E EALATLVVNKLRG   + A+KAPGFG+R+   L+DIAILTGG VI +E+G  L     E LG A KVV+TK+ TT+V G GST+  +  R+ QIR  +E    +++REKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDALN+T+AA           +L+ + +KV +I
Sbjct:  218 ILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQ-IEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI 427
[Close]
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 109/220 (49.55%), Postives = 157/220 (71.36%), Query Frame = 2 
Query:    5 KLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDA-IKETLDNDE 661
            ++L+ DKKI   +DL+ VLE   R   P+LI+AEDIE+EALATLVVN+LRG + +AA+KAPGFG+R+   L+DIA+LTGG VI ++ GL L+    ++LG A ++ +TKD TTIV +G+ ++ V  R  QIR  ++  +  Y++EKL ER+AKL+GGVAV++VGA TETE+K++KLR+EDA+NATKAA           TL  L+ +++    E L ++E
Sbjct:  218 QILITDKKIALVQDLVPVLEQVARSGKPLLILAEDIEKEALATLVVNRLRGVVNVAAVKAPGFGDRRKAMLEDIAVLTGGQVITEDAGLKLENAKLDMLGKARRITITKDNTTIVAEGNEKE-VKARCEQIRRQMDETDSSYDKEKLQERLAKLAGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPELETWANENLQSEE 436
The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACCZ6.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH60_BACCQ6.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH60_BACCE6.750e-5553.5560 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 ... [more]
CH60_BACC76.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]
CH60_BACC46.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH60_BACC36.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH60_BACC16.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH60_BACC06.750e-5553.5560 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH60_BACAH6.750e-5553.5560 kDa chaperonin OS=Bacillus thuringiensis (strai... [more]
CH602_TRIEI6.750e-5549.5560 kDa chaperonin 2 OS=Trichodesmium erythraeum (s... [more]

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Properties
Property NameValue
Genbank descriptionC34008G03EF PostHarvC1 Citrus clementina cDNA clone C34008G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bp
CTGCAAGTTGCTTCTTGTGGATAAAAAGATTACCAATGCAAGGGACCTTA
TCAACGTTTTGGAAGATGCGATTAGAGGTGCATACCCAATTTTGATTATT
GCAGAAGATATTGAGCAAGAAGCACTGGCAACTCTTGTCGTGAACAAGCT
GAGAGGTGCATTGAAGATTGCTGCTCTTAAAGCTCCTGGTTTTGGAGAGC
GCAAGAGCCAGTACCTTGACGACATTGCTATTTTGACTGGAGGAACTGTA
ATCAGAGATGAGGTGGGACTTGCCTTGGACAAAGTTGGCAAGGAGGTCCT
AGGTAATGCTTCTAAAGTTGTGCTCACAAAGGATACCACCACCATTGTGG
GGGATGGCAGCACCCAGGATGCAGTGAGCAAACGAGTGGCGCAAATCAGA
ACTCTAATTGAGAACGCTGAGCAAGACTATGAAAGGGAGAAGCTTAATGA
AAGAATTGCTAAACTGTCAGGTGGTGTTGCTGTCATACAGGTTGGAGCTC
AAACTGAGACAGAGCTTAAAGAGAAGAAGTTGAGAGTCGAAGATGCTCTT
AATGCAACAAAGGCTGCAGTTGAGGAAGGTATCGTAGTTGGTGGCGGATG
TACTCTACTGAGACTCTCATCTAAGGTGGATGCCATTAAGGAAACCCTTG
ATAATGATGAAGAAAAGGTTGGAG
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