FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_STRMK (60 kDa chaperonin OS=Stenotrophomonas maltophilia (strain K279a) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 111/211 (52.61%), Postives = 152/211 (72.04%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 640 +LL DKKI+N RDL+ VLE + P+LI+AE++E EALATLVVN +RG +K+ A+KAPGFG+R+ L+D+A+LTGGTVI +EVGL+L+K + LG A KV ++K+ TTI+ + V RVAQI+T I++ DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA L+R + + +K Sbjct: 220 ILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTVISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKANVDARVAQIKTQIQDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAITALAGLK 430
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_RHOS5 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 112/222 (50.45%), Postives = 154/222 (69.37%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL +KK+++ + ++ +LE I+ P+LI+AED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG A KV + KD TTIV + + RV+QIRT IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ +D + T +N ++ G Sbjct: 220 ILLHEKKLSSLQPMVPLLESVIQAQRPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGL--TGENPDQNAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_RHOPA (60 kDa chaperonin OS=Rhodopseudomonas palustris GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 112/222 (50.45%), Postives = 154/222 (69.37%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL +KK+++ + ++ +LE I+ P+LI+AED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG A KV + KD TTIV + + RV+QIRT IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ +D + T +N ++ G Sbjct: 220 ILLHEKKLSSLQPMVPLLESVIQAQRPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGL--TGENPDQNAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PSYCK (60 kDa chaperonin OS=Psychrobacter cryohalolentis (strain K5) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 111/222 (50.00%), Postives = 153/222 (68.92%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+++ +LE ++ + P+LIIAED+E EALATLVVN +RG LK A+KAPGFG+R+ L+DIA LTGGTVI +E+GL+L+ E LG A KV + K+ T IV + RV I+ +E + DY++EKL ER+AKL+GGVAVI+VGA TETE+KEKK RV+DAL+AT+AA L+R + + ++ DND++ G Sbjct: 219 ILLVDKKISNIREIVPLLEQVMQQSKPLLIIAEDVENEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLEDIATLTGGTVISEEIGLSLETATLEQLGTAKKVTVGKENTVIVDGAGNSADIENRVESIKRQVEESTSDYDKEKLQERMAKLAGGVAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAMNALSELRG--DNDDQNAG 438
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 112/218 (51.38%), Postives = 150/218 (68.81%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDE 661 +L+ DKKI+N ++++ +LE + P+LIIAED+E EALATLVVNK+RG A+KAPGFG+R+ L+DIAILTGG VI +++GL L+ +LG A KV +TK+ TTIV + R+ QIRT IEN + D++REKL ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TL+ +D + L+ DE Sbjct: 219 ILITDKKISNIQEILPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKIRGTFNCVAVKAPGFGDRRKAMLEDIAILTGGQVITEDLGLKLENADISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLIDAIPALDEL--NLEGDE 434
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 114/223 (51.12%), Postives = 161/223 (72.20%), Query Frame = 2 Query: 8 LLLVDKKITNAR-DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +L+ DKKIT + DL+ VLE + P+LIIAEDIE+EALATL+VNKLRG L + A+KAPGFG+R+ L+DIAILTGG +I ++ GL+LDKV +LG A+KV++ K++TTI+ + + ++ V R QIR IE + YE+EKL ER+AKL+GG+AVI+VGA TETE+K+KKLR+EDA+NATKAA TL+ L++ + + + ++E +G Sbjct: 219 VLITDKKITLVQQDLLPVLEQIAKTNKPLLIIAEDIEKEALATLIVNKLRGILNVVAVKAPGFGDRRKSILEDIAILTGGQLITEDAGLSLDKVDLSMLGQANKVIVNKESTTIISN-ANENNVKARCEQIRKQIEITDSSYEKEKLQERLAKLAGGIAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGATLVHLANDLFNWAKGVLKEDELIG 440
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 115/222 (51.80%), Postives = 152/222 (68.47%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKK+++ ++L+ VLE + P+LIIAED++ EAL+TLVVNKLRGALKIAA+KAPGFG+R+ L+DIAILTGGTVI +E G L+ E+LGNA +V + KD TTIV D + RV QI+ +E DY++EKL ER+AKL+GGVAV+ VGA +E E+KEKK RV+DAL+AT+AA LLR + +K DN +E G Sbjct: 220 ILLYDKKVSSLKELLPVLEPVAQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGYTLENTTIEMLGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLRAKLALADLK--ADNADEATG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 110/222 (49.55%), Postives = 154/222 (69.37%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +L+ D+KI+ +++ +LE ++ P++IIAED+E EALATLVVNKLRG L+ A+KAPGFG+R+ L DIAILTGG I +E G+ L+ V ++LG A KV KD TTI+G + + R+AQI+ +E + +++REKL ER+AKL+GGVAVI+VGA TE ELKEKK R+EDAL+ATKAA LLR +D +K +DN++E++G Sbjct: 220 ILITDRKISAVSEILPILERVVQTGKPLVIIAEDVEGEALATLVVNKLRGVLQSLAVKAPGFGDRRKAMLQDIAILTGGQFISEETGIKLENVTLDMLGRAEKVRANKDKTTIIGGKGNKKDIEARIAQIKKQLEETDSEFDREKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDALSATKAAVEEGIVPGGGVALLRTIKALDDVK--VDNEDERIG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_DIAST (60 kDa chaperonin OS=Diaphorobacter sp. (strain TPSY) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 116/222 (52.25%), Postives = 149/222 (67.12%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N RDL+ LE + + P+LIIAE+++ EALATLVVN +RG LK+ A+KAPGFG+R+ L+DIAILTGG VI +EVGL L+KV LG A ++ + K+ TTI+ + RV QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR V + + N E+ G Sbjct: 220 VLLFDKKISNIRDLLPTLEQVAKASRPLLIIAEEVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRIQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALLRAKQAVGNL--STGNPEQDAG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 108/212 (50.94%), Postives = 152/212 (71.70%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIR-GAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 640 +L+ DKK+++ ++L+ VLE ++ G P+L+I ED+E EALATLV+NKLRG L + A+KAPGFG+R+ L+DIAILTGGTVI +EVGL LDK ++LG A ++ + K+ T IVG Q + R+AQI+ IE D++REKL ER+AKL+GGVAVIQVGA TE E+KEKKLR++DALNAT+AA + + + +D+++ Sbjct: 218 ILITDKKVSSVQELLPVLEKVVQTGNKPVLLICEDLEGEALATLVLNKLRGTLNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEEVGLKLDKAELDMLGTARQIRVKKEETIIVGGAGEQAQIEGRIAQIKKQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATEVEMKEKKLRIDDALNATRAAVEEGIVPGGGSAFVNIITTLDSVQ 429 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |