FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHIBS (60 kDa chaperonin OS=Shigella boydii serotype 4 (strain Sb227) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHIB3 (60 kDa chaperonin OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SERMA (60 kDa chaperonin (Fragment) OS=Serratia marcescens GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LT GTVI +E+GL L+K E LG A +VV+ KDTT I+ + + RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++ K+ A+K DN+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKDMLQDIATLTAGTVISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVAGKIAALKG--DNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOUT (60 kDa chaperonin OS=Escherichia coli (strain UTI89 / UPEC) GN=groL PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOSM (60 kDa chaperonin OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOSE (60 kDa chaperonin OS=Escherichia coli (strain SE11) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOLU (60 kDa chaperonin OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOLI (60 kDa chaperonin OS=Escherichia coli (strain K12) GN=groL PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOLC (60 kDa chaperonin OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECOL6 (60 kDa chaperonin OS=Escherichia coli O6 GN=groL PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |