FC930549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECO45 (60 kDa chaperonin OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECO27 (60 kDa chaperonin OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_ECO24 (60 kDa chaperonin OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=groL PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_ECOK1 (60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59 Identity = 121/222 (54.50%), Postives = 160/222 (72.07%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL DKKI+N R+++ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA LTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RVAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++ VG Sbjct: 220 ILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEDQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 121/222 (54.50%), Postives = 161/222 (72.52%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LL+DKK++N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGG VI +EVGL L+KV E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG Sbjct: 220 ILLIDKKVSNIRELLPALEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGMGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEG--DNEEQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHEWM (60 kDa chaperonin OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 118/222 (53.15%), Postives = 162/222 (72.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKK++N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +V++TKD TTI+ QD + RVAQI+ E + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G Sbjct: 220 ILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIQARVAQIKVQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIADVE--VINEDQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHESH (60 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 118/222 (53.15%), Postives = 162/222 (72.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKK++N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +V++TKD TTI+ QD + RVAQI+ E + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G Sbjct: 220 ILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIKARVAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIAEVE--VINEDQKHG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_SHEFN (60 kDa chaperonin OS=Shewanella frigidimarina (strain NCIMB 400) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 116/219 (52.97%), Postives = 162/219 (73.97%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 664 +LLVDKK++N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +V++TKD TTI+ Q +S RV+QI+ +E++ DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ + E L+ D++ Sbjct: 220 ILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIKDV-EVLNEDQK 437
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 121/222 (54.50%), Postives = 159/222 (71.62%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKK++N R+L+ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILT GTVI +E+G+ L+K E LG A +VV+ KD TTI+ + + RVAQIR IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SKV ++ DN+E+ VG Sbjct: 220 ILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIQGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAASKVAGLQG--DNEEQNVG 439
BLAST of FC930549 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59 Identity = 123/222 (55.41%), Postives = 161/222 (72.52%), Query Frame = 2 Query: 8 LLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 673 +LLVDKKI+N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL L+K E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG Sbjct: 220 ILLVDKKISNIRELLPALEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKIVDLQG--DNEEQNVG 439 The following BLAST results are available for this feature:
BLAST of FC930549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930549 ID=FC930549; Name=FC930549; organism=Citrus clementina; type=EST; length=674bpback to top |