FC930573

Overview
NameFC930573
Unique NameFC930573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930573 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  380 IDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWEWF-AGNLGIRSA 718
            +  L GGVS  ++K+  AP+ERVK+L Q + +M         +  +    K  +K+EG+  LW+GNTA ++R FP  A+ +   DY K   NF  D+    + F AG+LG   A
Sbjct:   13 VTLLAGGVSGVIAKSTIAPLERVKILYQVKSKMYS-------FNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAGSLGFSCA 117
The following BLAST results are available for this feature:
BLAST of FC930573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MCFR_DICDI1.262e-1235.96Mitochondrial substrate carrier family protein R O... [more]

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Properties
Property NameValue
Genbank descriptionC34009A03EF PostHarvC1 Citrus clementina cDNA clone C34009A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930573 ID=FC930573; Name=FC930573; organism=Citrus clementina; type=EST; length=732bp
GACGCCGGCCTCCACCACAAAAAAGCAAAATATCTCTGCTTCTCTCGCTT
TTCGCACGCCATTCCTATCTAAGCAGAGCGGGAGGCGGGCACCAATCTGT
CATTTTTAAGGAAAAGTCACAATGATTGATCAGGTTCAACATCCTTCCGT
CATGCAGAAGGTAGCTGGACAGCTCCTTCATTCCAGCCTTTCCCAAAATA
TTCAGGATTATGAAAGGCCAACCATGTACCAAAGACGTGGTGCTTATGGG
AACTACTCCAATGCTGCATTCCAATACCCCATAGTCAGTGCAGCTACTAC
CGATCTATCTATGGTGCCGTCAACTGCATCTGCTATTTGCGTCCAAGCCC
CAGCTGAGAAAGGCTTTGCAGGCTTTGCTATCGATTTCCTTATGGGTGGA
GTTTCTGCTGCTGTGTCCAAAACAGCTGCTGCTCCCATTGAGCGTGTTAA
GCTTTTGATTCAAAACCAAGATGAGATGATCAAGAGTGGTAGGCTATCTG
AACCCTACAAGGGCATTGGTGATTGTTTTAAGCGTACAATGAAGGATGAG
GGTATTGTTGCTTTGTGGAGAGGAAATACTGCTAATGTTATCCGTTACTT
CCCCACTCAGGCCCTGAACTTTGCATTCAAGGATTACTTCAAGAGGCTCT
TCAACTTCAAGAAAGACAGGGATGGTTACTGGGAATGGTTTGCTGGTAAT
TTGGGGATCAGGAGTGCTGCTGGTGCTTCATC
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