FC930589

Overview
NameFC930589
Unique NameFC930589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20
Identity = 46/129 (35.66%), Postives = 84/129 (65.12%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            D++ G Y+    +++  RY++L+ IG+G+FGQV+   D +T E VA+K+VR+ K++   A  EI +L  L+R+D+  + + + + ++F +RNH CI FE+L  +LY+ ++K  ++ F + LVR+    L
Sbjct:  258 DNEQGAYIHVPHDHVAYRYEMLKIIGKGSFGQVIKAYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCITFELLSINLYELIKKNGFKGFSLQLVRKFAHSL 386          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.804e-20
Identity = 45/123 (36.59%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVR 710
            DD +G+Y     +++  RY+IL  IG+G+FGQV+  LD +T   VAIK++R+ K++   A+ E+++L+ L+  D  GSH  + + ++  +R H+CI FE++  +LY+ ++K  Y  F + L+R
Sbjct:  180 DDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYNGFSMSLIR 302          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYR1A_XENTR (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus tropicalis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.818e-19
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D     + V ++  F +RNH+C+VFEML  +LYD LR   +R   ++L R+  +Q+
Sbjct:  133 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRAEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 261          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYR1A_XENLA (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D     + V ++  F +RNH+C+VFEML  +LYD LR   +R   ++L R+  +Q+
Sbjct:  133 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 261          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYR1A_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus GN=Dyrk1a PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D     + V ++  F +RNH+C+VFEML  +LYD LR   +R   ++L R+  +Q+
Sbjct:  141 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 269          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYR1A_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D     + V ++  F +RNH+C+VFEML  +LYD LR   +R   ++L R+  +Q+
Sbjct:  141 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 269          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYR1A_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19
Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D     + V ++  F +RNH+C+VFEML  +LYD LR   +R   ++L R+  +Q+
Sbjct:  141 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 269          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: MNB_DROME (Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 48/129 (37.21%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD +  Y+   GE    RY+I   IG+G+FGQV+   D E    VAIK++++ K +   A  E+ +LE++ R D     + V+++  F +RNH+C+VFE+L  +LYD LR   +R   ++L R+  +QL
Sbjct:  146 DDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQL 274          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK2_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Mus musculus GN=Dyrk2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 44/129 (34.11%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  + + + +   F +RNHIC+ FE+L  +LY+ ++K  ++ F + LVR+    +
Sbjct:  202 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 330          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 44/129 (34.11%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  + + + +   F +RNHIC+ FE+L  +LY+ ++K  ++ F + LVR+    +
Sbjct:  204 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 332          
The following BLAST results are available for this feature:
BLAST of FC930589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
DYRK3_DROME2.147e-2035.66Putative dual specificity tyrosine-phosphorylation... [more]
DYRK2_DROME2.804e-2036.59Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_XENTR1.818e-1937.98Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_XENLA2.374e-1937.98Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_RAT2.374e-1937.98Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_MOUSE2.374e-1937.98Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_HUMAN2.374e-1937.98Dual specificity tyrosine-phosphorylation-regulate... [more]
MNB_DROME5.289e-1937.21Serine/threonine-protein kinase minibrain OS=Droso... [more]
DYRK2_MOUSE6.907e-1934.11Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_HUMAN6.907e-1934.11Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionC34009B08EF PostHarvC1 Citrus clementina cDNA clone C34009B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930589 ID=FC930589; Name=FC930589; organism=Citrus clementina; type=EST; length=732bp
GAAAGAACAGCGGCCTCACAAGCTTTTGCGACAAGGAAGAAAAATTCAAT
TGATCTCTTCCCGTAATTGATGAATCGATAAGTCAATCTGGGGTTAGGGT
TTTGTATCAGATGGAAATGGACTACGTTACAGGGTTTGCTCACAGTCACA
TGGATCGTCGTCCCACGAAGAGACCTCGATTAGCTTGGGAAAACCCTCAA
GCTCACTCTAAGGCTCAGTCAGGAATGTATTGTGGACAAGAGTTGGGGAA
TCTGACAAGCTTTGGGCCATCAAGGGTACATGCAGACCATGCTAGTATGT
TTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAATGATGAC
AAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTTCTCGCTA
TAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTTTTGGATT
GTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGTGCGAAGT
ATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGCTTGAGTT
GCTCAAAAGATATGACAGAAGTGGCAGTCATTGTGTTCAAATAAGGAACT
GGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCTTGGACCT
AGCCTATACGATTTTCTTCGGAAAAAGTATTATCGCCCATTTCCGGTTGA
TCTTGTCCGTGAGATTGGCAGACAACTGNTGG
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