FC930589

Overview
NameFC930589
Unique NameFC930589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 43/129 (33.33%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  + + + +   F +R+HIC+ FE+L  +LY+ ++K  ++ F + LVR+    +
Sbjct:  129 DDDQGSYIQVPHDHIAYRYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRSHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 257          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18
Identity = 42/129 (32.56%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD++  Y+  +GE    R++I+  +G+G+FGQV+   D    E VAIK++++   +   A+ EI +LEL+   D    +  +++++ F +RNH+CIV E+L  +LYD LR  ++    ++L+++   Q+
Sbjct:  286 DDENADYIVRIGEVFVDRFEIISSLGKGSFGQVVKAFDSVLKEYVAIKIIKNKVPFYNQALIEIRLLELMNNKDPEDQYKIIKLKHHFKFRNHLCIVTELLSYNLYDLLRNTHFHGVSLNLIKKFAHQI 414          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: PRP4B_DICDI (Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum GN=prpf4B PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG---SHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDL--VREIGRQL 728
            DD DG+Y F +GE +  +Y+I   IG G F  V+   + +T E V IK++R+      + + EI++L+ +     S    SHC+Q+++ F+YRNH+CIVFE +  SL+  + KKY +   + L  VR   +QL
Sbjct:  473 DDADGYYKFRVGE-IMDKYQIFSPIGSGVFSTVVSAKETKTNEDVVIKIIRNRPSMHRSGLKEIEILQKISNTPTSSNQKSHCIQMKDHFNYRNHLCIVFEPMSMSLHQLI-KKYGKDIGLSLNAVRVYAKQL 603          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L        + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R + +Q+
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQV 308          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L        + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R + +Q+
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQV 308          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L        + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R + +Q+
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQV 308          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R I +Q+
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQV 299          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R I +Q+
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQV 299          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F ++NH C+VFEML  +LYDFL++  + P P+  +R I +Q+
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQV 299          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17
Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  267 PSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            P R   +      +  ++ G      DD++  Y+   GE    RY IL    +G+G+FGQV    D  T E VAIK++++ K + + A  EI +LEL   +D+   +  V ++  F +R H+C+VFE+L  +LYD L+   +R   ++L R+  +QL
Sbjct:  321 PMRTETESQQQMRQKSSRGGPYNNGYDDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTVTKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTNFRGVSLNLARKFAQQL 477          
The following BLAST results are available for this feature:
BLAST of FC930589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
DYRK2_CHICK2.010e-1833.33Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK1_DICDI3.428e-1832.56Probable serine/threonine-protein kinase dyrk1 OS=... [more]
PRP4B_DICDI5.847e-1836.84Serine/threonine-protein kinase prpf4B OS=Dictyost... [more]
HIPK2_MOUSE1.303e-1735.65Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]
HIPK2_MESAU1.303e-1735.65Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN1.303e-1735.65Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
HIPK1_RAT1.701e-1736.52Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE1.701e-1736.52Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN1.701e-1736.52Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
MBK1_CAEBR2.222e-1732.48Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionC34009B08EF PostHarvC1 Citrus clementina cDNA clone C34009B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930589 ID=FC930589; Name=FC930589; organism=Citrus clementina; type=EST; length=732bp
GAAAGAACAGCGGCCTCACAAGCTTTTGCGACAAGGAAGAAAAATTCAAT
TGATCTCTTCCCGTAATTGATGAATCGATAAGTCAATCTGGGGTTAGGGT
TTTGTATCAGATGGAAATGGACTACGTTACAGGGTTTGCTCACAGTCACA
TGGATCGTCGTCCCACGAAGAGACCTCGATTAGCTTGGGAAAACCCTCAA
GCTCACTCTAAGGCTCAGTCAGGAATGTATTGTGGACAAGAGTTGGGGAA
TCTGACAAGCTTTGGGCCATCAAGGGTACATGCAGACCATGCTAGTATGT
TTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAATGATGAC
AAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTTCTCGCTA
TAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTTTTGGATT
GTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGTGCGAAGT
ATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGCTTGAGTT
GCTCAAAAGATATGACAGAAGTGGCAGTCATTGTGTTCAAATAAGGAACT
GGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCTTGGACCT
AGCCTATACGATTTTCTTCGGAAAAAGTATTATCGCCCATTTCCGGTTGA
TCTTGTCCGTGAGATTGGCAGACAACTGNTGG
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