FC930589

Overview
NameFC930589
Unique NameFC930589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17
Identity = 42/115 (36.52%), Postives = 69/115 (60.00%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++ + Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F +RNH C+VFEML  +LYDFL++  + P P+ ++R I +Q+
Sbjct:  192 SMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPILQQV 306          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK3_RAT (Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 46/128 (35.94%), Postives = 72/128 (56.25%), Query Frame = 3
Query:  354 DGHYLFALGENLTS---RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            +G Y     E L S    Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F +RNH C+VFEML  +LYDFL++  + P P+ ++R + +Q+
Sbjct:  179 EGDYQLVQHEVLCSVKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQV 306          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: HIPK3_MOUSE (Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 3
Query:  384 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            ++ + Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +    + V+    F +RNH C+VFEML  +LYDFL++  + P P+ ++R + +Q+
Sbjct:  192 SMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQV 306          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: PRP4_SCHPO (Serine/threonine-protein kinase prp4 OS=Schizosaccharomyces pombe GN=prp4 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG-SHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK 674
            DD +G+Y   L E L SRY +   +G+G F  V+  LDR   +T AIK++R+ +   +  + E+ +LE L+  DR G  H +     F ++NH+C+VFEML  +L D L+K
Sbjct:  141 DDIEGYYKVVLMEELDSRYIVQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNNEVMYKEGLKEVSILERLQAADREGKQHIIHYERHFMHKNHLCMVFEMLSLNLRDILKK 251          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 44/120 (36.67%), Postives = 73/120 (60.83%), Query Frame = 3
Query:  375 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL-KRYD-RSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            LG +   +Y IL  +G GTFGQV  C D +T + VAIKV+++   +    + E+ +LELL  +YD     H +++ + F ++NH+C+VFE+L  +LY+ +++  +R   + LVR    QL
Sbjct:  122 LGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQFRGLHLSLVRSFATQL 241          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: MBK1_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD++  Y+   GE    RY IL    +G+G+FGQV    D    E VAIK++++ K + + A  EI +LEL   +D+   +  V ++  F +R H+C+VFE+L  +LYD L+   +R   ++L R+  +QL
Sbjct:  308 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTLNKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTSFRGVSLNLARKFAQQL 438          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: YAK1_YEAST (Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae GN=YAK1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16
Identity = 54/171 (31.58%), Postives = 92/171 (53.80%), Query Frame = 3
Query:  231 CGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFA---LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL-KRYDRSGS-HCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            C  E    TS  P RV    +    +G   NG     +D    + L+    LG     +Y +L  +G+GTFGQV+ C +  T E +A+KVV+S  +Y   ++TE  +LELL ++ D +   H +++ + F ++NH+C+VFE+L  +LY+ L++  +    + L+R    Q+
Sbjct:  318 CSPEFTYQTSKNPKRVLTKPS----EGKCNNGFDNINSD----YILYVNDVLGVEQNRKYLVLDILGQGTFGQVVKCQNLLTKEILAVKVVKSRTEYLTQSITEAKILELLNQKIDPTNKHHFLRMYDSFVHKNHLCLVFELLSNNLYELLKQNKFHGLSIQLIRTFTTQI 480          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: YAK1_ENCCU (Probable dual specificity protein kinase YAK1 homolog OS=Encephalitozoon cuniculi GN=YAK1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  375 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            L +N + +Y I+  +G GTFGQV+ C+  + GE VAIKVV++  KY    M E+ +L  L  Y+      V I++ F Y+ H+CIV E+LG +LY FL+   ++      +R I  Q+
Sbjct:   32 LAKNKSQKYMIIDMLGTGTFGQVVRCVGSD-GEEVAIKVVKNQPKYYNYEMNEVRILHKLL-YNNLNDRFVTIKDVFMYKQHLCIVEELLGRNLYTFLKMTRFKGLDHPTLRTILHQI 147          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: YAKA_DICDI (Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 47/167 (28.14%), Postives = 94/167 (56.29%), Query Frame = 3
Query:  231 CGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTS-----RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-RYD-RSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVR 710
            C      ++S  P RV   H S   + L+ +G      D+ +  Y+  + + +T+     +YK+L  +G+GTFGQV+ C + +T E VAIK++++ + Y +    EI  L+ L  ++D    +H +++ + F ++ H+CIVFE+L  +L++ +++  +R    +L++
Sbjct:  153 CNSNFNYISSLNPRRV-LTHPS---EPLSNDGY-----DNVNSDYIVYVNDIITNNESGQKYKVLDSLGQGTFGQVVKCKNCDTDELVAIKILKNKQAYFQQGRLEIQTLKSLNDQHDPEDKNHILRLLDSFIHKMHLCIVFELLSVNLFELIKQNNFRGLSTNLIK 310          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13
Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  357 GHYLFALGENLTSR-YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR---SGSHCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            G++   +GE    R Y + RK+G G F  V    DR     VA+KVVRS + YRE ++ EI +L+ ++  D       H + + ++F +R     H+C+VFE+LG +L   ++   +R  PV +V++I  QL
Sbjct:   66 GYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSAEHYRETSIDEIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFEVLGENLLSLIQSYGHRGVPVGIVKQIAYQL 197          
The following BLAST results are available for this feature:
BLAST of FC930589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
HIPK3_HUMAN2.222e-1736.52Homeodomain-interacting protein kinase 3 OS=Homo s... [more]
HIPK3_RAT2.902e-1735.94Homeodomain-interacting protein kinase 3 OS=Rattus... [more]
HIPK3_MOUSE2.902e-1735.65Homeodomain-interacting protein kinase 3 OS=Mus mu... [more]
PRP4_SCHPO1.103e-1638.74Serine/threonine-protein kinase prp4 OS=Schizosacc... [more]
PPK15_SCHPO1.440e-1636.67Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
MBK1_CAEEL1.440e-1635.88Dual specificity tyrosine-phosphorylation-regulate... [more]
YAK1_YEAST7.148e-1631.58Dual specificity protein kinase YAK1 OS=Saccharomy... [more]
YAK1_ENCCU2.299e-1438.14Probable dual specificity protein kinase YAK1 homo... [more]
YAKA_DICDI6.690e-1428.14Probable serine/threonine-protein kinase yakA OS=D... [more]
DSK1_SCHPO2.542e-1334.09Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionC34009B08EF PostHarvC1 Citrus clementina cDNA clone C34009B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930589 ID=FC930589; Name=FC930589; organism=Citrus clementina; type=EST; length=732bp
GAAAGAACAGCGGCCTCACAAGCTTTTGCGACAAGGAAGAAAAATTCAAT
TGATCTCTTCCCGTAATTGATGAATCGATAAGTCAATCTGGGGTTAGGGT
TTTGTATCAGATGGAAATGGACTACGTTACAGGGTTTGCTCACAGTCACA
TGGATCGTCGTCCCACGAAGAGACCTCGATTAGCTTGGGAAAACCCTCAA
GCTCACTCTAAGGCTCAGTCAGGAATGTATTGTGGACAAGAGTTGGGGAA
TCTGACAAGCTTTGGGCCATCAAGGGTACATGCAGACCATGCTAGTATGT
TTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAATGATGAC
AAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTTCTCGCTA
TAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTTTTGGATT
GTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGTGCGAAGT
ATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGCTTGAGTT
GCTCAAAAGATATGACAGAAGTGGCAGTCATTGTGTTCAAATAAGGAACT
GGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCTTGGACCT
AGCCTATACGATTTTCTTCGGAAAAAGTATTATCGCCCATTTCCGGTTGA
TCTTGTCCGTGAGATTGGCAGACAACTGNTGG
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