FC930592

Overview
NameFC930592
Unique NameFC930592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.122e-60
Identity = 113/227 (49.78%), Postives = 157/227 (69.16%), Query Frame = 3
Query:   51 YAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +A ++   SVL M +K+ I L L EII   G    +S +EIA+ LP T N DAP M+DRIL LL+ Y +V CSV  VD   R+YGL  V KY   NQDGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G ++FEY G DPRFN+VF+  M +H+T+ ++K+ + Y+GF+ +  LVDVGG  G TL  I SKYP I+ INFDLPHVI+ +PEYPG++HVG
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTT-NPDAPAMVDRILRLLSCYSVVTCSVRSVD-DQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVG 225          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.175e-60
Identity = 110/237 (46.41%), Postives = 158/237 (66.67%), Query Frame = 3
Query:   36 DENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAK--LSASEIAAQLPATKNKDAPT--MLDRILGLLASYGIVECSVDDVDGSH-RLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +E   YA ++   S+L MT+K  I LGL E++ K   G K  L+  E+ A++PA  +  A    M+DR+L LLASY +V C ++D DG + R Y    V K+  PN+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G D RFN VF+  M NH+ ++ +K+L+ Y GFE +  LVDVGG +G TL AITS++PHI G+NFDLPHVI  +P +PGV+HVG
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVG 250          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.682e-57
Identity = 108/247 (43.72%), Postives = 160/247 (64.78%), Query Frame = 3
Query:   15 NMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKA------GPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDD-VDGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +MA  A +E   YA ++   S+L MT+K  I LGL E +  A      G  A L+ +E+A +LP+  N  A  M+DR+L LLASY +V C +++  DG   R Y    V K+  PN+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G D RFN VF+  M NH+ ++ +K+L+ Y GF+    +VDVGG +G T+ A+ S++PHI+GIN+DLPHVI  +P +PGV+HVG
Sbjct:    7 DMAAAADEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVG 253          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.346e-57
Identity = 114/246 (46.34%), Postives = 159/246 (64.63%), Query Frame = 3
Query:    3 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKA-GPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDGS--HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            EIQ    + + +E   +A ++   +VL M +KA I L + EI+AK+  P   +S +EIAAQLP T N +AP MLDR+L LLASY +V  ++ ++      RLYGL  V K+   N+DGVSL P L    DK  L+ W  LK+ I+EGG+PF++ +G N F+Y G D RFN+VF+  M +++T+ ++KILE Y GFE +  +VDVGG  G     I +KYP I  INFDLPHVIQ +P + GV+H+G
Sbjct:    8 EIQIIPTHSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTT-NPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLG 252          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.020e-54
Identity = 109/235 (46.38%), Postives = 151/235 (64.26%), Query Frame = 3
Query:   33 RDENFA-YAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDG-SHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            +DE  A  A  +   +   M +K+   L + +I +KAG G  +S SEIA+Q+ A KN +AP +LDR+L LLAS+ ++ C +   +G S R+YG   +  Y   N    SLGP+L L  DK  ++SW  L + I+EGGVPF R HG   F+Y G D RFN VF+  M +HT LV++K+L+ Y GF  +K LVDVGG++G  +  I +K+ HIKGIN+DLPHVI  +P YPGV+HVG
Sbjct:   17 KDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGA-KNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVG 250          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.991e-50
Identity = 101/217 (46.54%), Postives = 150/217 (69.12%), Query Frame = 3
Query:   81 LHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGV-PFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHV 728
            L M ++A I L +FEII++AGP A+LS S+I A++P TKN  A   LDRIL +L +  I+  S      S R+YGLN+ S+  V ++D VS+ P+L    DKA ++S+  +K+ ++E GV PFDR HG + F+Y G + R N+ F+ AM   +T+   ++ + YKGF+++K+LVDVGG +G +L  I +K+PHI+GINF+LPHVI  +P+YPGV+HV
Sbjct:   51 LPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIP-TKNPSAAISLDRILRMLGASSILSVSTTK---SGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHV 263          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.250e-44
Identity = 100/242 (41.32%), Postives = 144/242 (59.50%), Query Frame = 3
Query:   21 ANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGP-GAKLSASEIAAQLPA-TKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVP-FDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            + +  D     A  +T   V    + A I+L LFEIIAKA P GA +S SEIA++LPA T++ D P  LDR+L LLASY ++  +   ++  G+ R+YGL+ V KY VP++    L      +   A L  W   KE +++  +  F  VHG   +E+ G D + N++F+ +M +     ++++LE Y GFE I  LVDVGG  G  L+ I SKYP IKGINFDLP VI+++P   G++HVG
Sbjct:   17 SEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVG 258          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 3
Query:    9 QENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATK-NKDAPTMLDRILGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETII-EGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKIL-EAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGV 719
            ++N++++A+  NF Y F  ++       +K  + L L  II  +G    ++ SE++++LP+   N+DA   L R++  L    +   +   +DG  R YGL   +KY V   D   +G +LA I DK F+  W  LK+ +  E G  F++  GTN + Y    P  N++F+ AM N + L++  ++ E    F  I  LVDVGG  G  ++ I + +PHIK   +DLPHVI  SP Y  V
Sbjct:    5 KDNLSSQAKLWNFIYGFAESL------VLKCAVQLDLANIIHNSG--TSMTLSELSSRLPSQPVNEDA---LYRVMRYLVHMKLFTKA--SIDGELR-YGLAPPAKYLVKGWDKCMVGSILA-ITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEV 229          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20
Identity = 65/230 (28.26%), Postives = 117/230 (50.87%), Query Frame = 3
Query:   48 AYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATK-NKDAPTMLDRILGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKG-FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG 731
            A+ +++  G    + ++  + LG+ +II        ++ +++A++LP +  N D    L RIL  L    I+   V+  D   + Y L  ++     N    S+ P++  +  K F+  W  +K+ + + G  F++  G   +EY    P  +++F+  M   T L+   ++   +  F+ I  LVDVGG  G T+KAI+  +PHIK   FDLPHVI +S + P ++ +G
Sbjct:   16 AHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQ--PMALADLASKLPVSDVNCDN---LYRILRYLVKMEILR--VEKSDDGQKKYALEPIATLLSRNAKR-SMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIG 237          
BLAST of FC930592 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 57/218 (26.15%), Postives = 99/218 (45.41%), Query Frame = 3
Query:   93 MKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRI---LGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKG---FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHV 728
            +++ ++LG+ +II   GP   ++ S++   LP        T +DR    +  L    +   S D +    + Y L   SK  V      SL P + L         WS +   +++G  P+   + T+ +E    DP  NE+ + AM +H+T +L  ++         + +  +VDVGG+ G   K I   +PH+K    DL HVI+   + P + +V
Sbjct:   32 LRSTVSLGIPDIIHNNGP---VTLSQLVTHLPLKS-----TSIDRFHHFMRYLVHMQLFTISTDQITKEDK-YELTPASKLLVHGHQK-SLAPYVMLQTHPEEFSVWSHVIN-VLDGKKPYWESNDTSMYEKTEGDPEINEILNDAMTSHSTFMLPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVKCSVMDLNHVIERVIKNPKLDYV 238          
The following BLAST results are available for this feature:
BLAST of FC930592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
OMT2_CHRAE2.122e-6049.78Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
COMT1_MAIZE6.175e-6046.41Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.682e-5743.72Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IEMT_CLABR8.346e-5746.34(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
IMT1_MESCR1.020e-5446.38Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA1.991e-5046.54(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.250e-4441.32Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA3.781e-2533.75(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA1.644e-2028.263'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
COOMT_COPJA2.152e-1226.15Columbamine O-methyltransferase OS=Coptis japonica... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34009B11EF PostHarvC1 Citrus clementina cDNA clone C34009B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930592 ID=FC930592; Name=FC930592; organism=Citrus clementina; type=EST; length=731bp
GGGAAATTCAAGAAAATATGGCTAATGAAGCGAGAGACGAAAACTTTGCA
TATGCCTTTGAAGTGACGATGGGTTCAGTGCTCCACATGACCATGAAAGC
AGTAATTAATCTGGGACTTTTCGAGATCATAGCCAAAGCTGGTCCTGGAG
CAAAGCTCTCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACGAAGAAC
AAAGACGCACCCACGATGCTGGACCGGATACTCGGGCTTCTGGCTAGCTA
TGGCATTGTTGAATGCTCAGTTGATGATGTCGATGGTTCTCACAGGCTAT
ACGGTTTGAATGATGTTTCCAAATACTTTGTGCCTAATCAAGATGGTGTC
TCATTAGGCCCTGTATTGGCCTTAATTCAGGACAAGGCCTTTCTCGACAG
CTGGTCCCAACTGAAAGAAACTATTATTGAAGGAGGAGTTCCATTTGACC
GAGTCCACGGAACGAACGCTTTCGAGTACCAAGGATTGGACCCCAGGTTC
AATGAAGTTTTCAGCACAGCAATGTACAACCATACCACTTTGGTCCTTCA
AAAGATCCTTGAGGCTTACAAGGGTTTCGAGCACATAAAGCAATTGGTTG
ATGTTGGCGGTTCCCTTGGCAATACCCTTAAAGCAATTACTTCCAAGTAT
CCCCACATTAAGGGCATCAATTTCGACTTGCCTCACGTTATACAGCATTC
CCCTGAGTATCCTGGTGTTAAGCATGTAGGG
back to top