FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLT2 (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ppa PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  272 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            AHPWH   +     +   C IEI     VK+ELDK++G++ VDR    S   P  YG +P+T C                   D DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F
Sbjct:    9 AHPWHGPVLTRDDYESLCCYIEITPADSVKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYF 164          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLCV (Inorganic pyrophosphatase OS=Chlamydophila caviae GN=ppa PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 56/155 (36.13%), Postives = 77/155 (49.68%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            HPWH   +     +   C IEI     VK+ELDK +GL+ VDR    S   P  YG +PRT C                   D+DPLD+ ++ ++ +  G   L+A+ IG + +ID GE DDKIIAV  DD  +    DI + P   L  I+ +F
Sbjct:   11 HPWHGPILTQDNYESLCCYIEITPQDSVKFELDKATGLLKVDRPQKFSNFCPCLYGLLPRTYCGELSGKYSGEQSLKENIQGDDDPLDICVLTEKNITHGNILLQARPIGGLRIIDSGEADDKIIAVLEDDLVFSEIQDISDCPCTVLDMIQHYF 165          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_WIGBR (Inorganic pyrophosphatase OS=Wigglesworthia glossinidia brevipalpis GN=ppa PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIK---ELPPHRLAEIRRFFE 685
            G   P     +IEI   S  +KYE+DKK+G++ V+R + +S+ YP NYG+I  T+  D DPLD+L+    PVL G  +R   IG++ MID+  +D KIIA+        + N+IK   ++     ++I  FFE
Sbjct:    9 GEKLPNDIYAIIEIPTNSNPIKYEVDKKTGILFVNRFIPTSMFYPCNYGYINHTISLDGDPLDILVPTPYPVLHGSVIRCNPIGVLKMIDESGEDAKIIAMPHQKLLAGYNNNIKNIDDISNLMKSQISHFFE 141          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BOVIN (Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 47/146 (32.19%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGL------IMVDRVLYSSVVYPH-----NYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKEL 646
            P+HD+ I     ++F+ V+E+ + S  K E+  K  L      +   ++ Y + ++P+     NYG IP+T             C DNDP+DV  I  +    G  +R K +G++ MID+GE D K+IA+  +DP+  +YNDI ++
Sbjct:   31 PFHDIPIYADK-EVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDPDAANYNDINDV 175          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYEL--DKKSGLIMVDRVLYSSVVYPHN----YGFIPRTLCE-------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPH---RLAEIRRFFED 688
            PWHD+ +  G   +FN ++EI K SK K E+  D+    I  D        YP+N    YG +P+T  +             DNDP+DV+ I +     G  L+ K +  + MID+GE D KI+A+  DDP+    ND++++  H    L  IR +F D
Sbjct:   92 PWHDIPLTLG-DGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPKAHLVNDVEDVEKHFPGTLTAIRDWFRD 249          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_MOUSE (Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGL------IMVDRVLYSSVVYPH-----NYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKEL 646
            P+HD+ I      +F+ V+E+ + S  K E+  K  L      +   ++ Y + ++P+     NYG IP+T             C DNDP+DV  I  +    G  +R K +G++ MID+GE D K+IA+  DDP+  +Y DI ++
Sbjct:   31 PFHDVPIYADKD-VFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYKDISDV 175          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_MACFA (Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGL------IMVDRVLYSSVVYPH-----NYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKEL 646
            P+HD+ I      +F+ V+E+ + S  K E+  K  L      +   ++ Y + ++P+     NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI ++
Sbjct:   31 PFHDIPIYADKD-VFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDV 175          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_HUMAN (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGL------IMVDRVLYSSVVYPH-----NYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKEL 646
            P+HD+ I      +F+ V+E+ + S  K E+  K  L      +   ++ Y + ++P+     NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI ++
Sbjct:   31 PFHDIPIYADKD-VFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDV 175          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_PONAB (Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.526e-13
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  278 PWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGL------IMVDRVLYSSVVYPH-----NYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKEL 646
            P+HD+ I      +F+ V+E+ + S  K E+  K  L      +   ++ Y + ++P+     NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI ++
Sbjct:   31 PFHDIPIYADKD-VFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKRKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINMDDPDAANYNDINDV 175          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_KLULA (Inorganic pyrophosphatase OS=Kluyveromyces lactis GN=IPP1 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  281 WHDLEI-GPGAPKIFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCE------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPH 655
            +HD+ +    A  IFN V+EI + +  K E+           D K G +   R  +    Y HNYG  P+T  +            DNDPLDVL I ++    G   + K +G+M ++D+GE D K+IA+  +DP     NDI+++  H
Sbjct:   30 FHDIPLYADEANGIFNMVVEIPRWTNAKLEITKEEPLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNESHPETKAVGDNDPLDVLEIGEQVAYTGQVKQVKVLGVMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKH 178          
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_CHLT22.360e-1735.26Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_CHLCV2.360e-1736.13Inorganic pyrophosphatase OS=Chlamydophila caviae ... [more]
IPYR_WIGBR5.257e-1738.35Inorganic pyrophosphatase OS=Wigglesworthia glossi... [more]
IPYR_BOVIN5.440e-1432.19Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE... [more]
IPYR1_ARATH1.212e-1333.96Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR_MOUSE2.067e-1332.19Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 ... [more]
IPYR_MACFA2.067e-1332.19Inorganic pyrophosphatase OS=Macaca fascicularis G... [more]
IPYR_HUMAN2.067e-1332.19Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
IPYR_PONAB3.526e-1332.19Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 ... [more]
IPYR_KLULA5.092e-1232.21Inorganic pyrophosphatase OS=Kluyveromyces lactis ... [more]

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Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
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