FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_AQUPY (Inorganic pyrophosphatase OS=Aquifex pyrophilus GN=ppa PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.129e-27
Identity = 63/137 (45.99%), Postives = 88/137 (64.23%), Query Frame = 2
Query:  281 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            + DL  G   P+    VIEI +GS +KYELDK +G+I VDR L++++ YP NYGFIP+TL +D DP+DVL+I +EPV PG  +R + IG++ M D+   D K+IAV  +  DP Y     + +LP      I+ FFE
Sbjct:    3 YKDLPPGKNPPEDIYVVIEIPQGSGIKYELDKDTGVIFVDRFLFTAMYYPFNYGFIPQTLADDGDPVDVLVISREPVAPGSVMRCRPIGMLEMRDEEGIDTKLIAVPHEKLDPTYSDIKTVDQLPEIIRERIKHFFE 139          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_STRCO (Inorganic pyrophosphatase OS=Streptomyces coelicolor GN=ppa PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.515e-27
Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            F+  IEI KGS+ KYE+D ++G I +DR L++S  YP +YGF+  TL ED DPLD L+I+ EP  PGC +R +AIG+  M D+   DDK++ V + DP   H  DI  +      EI+ FFE
Sbjct:    3 FDVTIEIPKGSRNKYEVDHETGRIRLDRRLFTSTAYPTDYGFVENTLGEDGDPLDALVILDEPTFPGCLIRCRAIGMFRMTDEAGGDDKLLCVPSTDPRVEHLRDIHHVSEFDRLEIQHFFE 124          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_SULTO (Inorganic pyrophosphatase OS=Sulfolobus tokodaii GN=ppa PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 2
Query:  290 LEIGPG--APKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            +++ PG  AP   N +IEI  GS +KYE D++  ++ VDR+LY+S+VYP NYGFIP TL ED DPLDVL+I   P+LPG  +  + IG++ M D+  +D KIIAV  D  DP + +  DI +LP     +I  FFE
Sbjct:    1 MKLSPGKKAPDEVNVLIEIPLGSNIKYEYDEEEEVVKVDRILYTSMVYPFNYGFIPGTLEEDGDPLDVLVISNYPLLPGTAIEVRPIGILYMRDEEGEDAKIIAVPKDKVDPTFSNIKDIIDLPQAIKDKINHFFE 136          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_SULAC (Inorganic pyrophosphatase OS=Sulfolobus acidocaldarius GN=ppa PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            L  G  AP + N ++EI +GS +KYE D + G+I VDRVLY+S+ YP NYGFIP TL ED DPLDVL+I    + PG  +  + IG++ M D+  +D KI+AV  D  DP + +  DI +LP     +I  FFE
Sbjct:    3 LSPGKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFE 136          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BRUSU (Inorganic pyrophosphatase OS=Brucella suis GN=ppa PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            + IG   P+  N +IE+  G + +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE
Sbjct:    6 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFE 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BRUME (Inorganic pyrophosphatase OS=Brucella melitensis GN=ppa PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            + IG   P+  N +IE+  G + +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE
Sbjct:    6 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFE 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_LEIXX (Inorganic pyrophosphatase OS=Leifsonia xyli subsp. xyli GN=ppa PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26
Identity = 53/121 (43.80%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            ++ VIEI KGS+ KYE+D ++G + +DRVL+++ VYP +YGF   TL +D DPLDVL++++ PV PG  ++ + +G++ M D+   D KIIAV   DP ++H  D+ ++P +   EI  FF
Sbjct:    4 YDVVIEIPKGSRNKYEVDHETGRVYLDRVLFTAFVYPADYGFFENTLGDDGDPLDVLVLLEYPVFPGVGIKVRPVGVLKMSDEAGGDAKIIAVQHKDPRWQHIQDVNDIPEYTRKEIEHFF 124          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAO (Inorganic pyrophosphatase OS=Pseudanabaena sp. (strain PCC 6903) GN=ppa PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 2
Query:  287 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRT--LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            DL   P  PK  I N +IEI  GSK KYE DK      +DRVLYSSV YP++YGF+P T  L +D DPLD ++IM  P  PG    A+ IG++ M+D G++D+K + V A DP Y +     +L  HRL EI  FF
Sbjct:    2 DLSRIPPQPKAGILNVLIEIPAGSKNKYEFDKDLNAFALDRVLYSSVQYPYDYGFVPITNNLADDGDPLDGMVIMVPPTFPG-VATARPIGMLQMVDGGDRDEKFLCVPAKDPRYTYVKSANDLAGHRLDEIFEFF 136          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_METMA (Inorganic pyrophosphatase OS=Methanosarcina mazei GN=ppa PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 2
Query:  329 VIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            +IEI +GS+ KYE DK+  +I  DR+L+SS+VYP +YGF P TL  D DPLD +++M EP  PGC +    + ++ M D   +D+KI+ V   DP + +   I+++PPH L EI  FFE
Sbjct:   10 LIEIPQGSRNKYEYDKERKVIRFDRMLFSSIVYPCDYGFFPDTLALDGDPLDAMVLMWEPTFPGCVIDVHPVAMLDMEDDKGRDEKILCVPQRDPLWNYIKTIEQVPPHLLKEITHFFE 128          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_METAC (Inorganic pyrophosphatase OS=Methanosarcina acetivorans GN=ppa PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 2
Query:  314 KIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            ++ + +IEI KGS+ KYE DK+  +I  DR+L+SS+VYP +YGF P TL  D DPLD L++  EP  PGC +    + L+ M D   +D+KI+ V   DP + +   ++++PPH L EI  FFE
Sbjct:    8 QVESVLIEIPKGSRNKYEYDKEKKVIKFDRMLFSSMVYPCDYGFFPDTLALDGDPLDALVLTWEPTFPGCVIDVHPVALLDMKDDKGRDEKILCVPETDPLWNYIETLEQVPPHLLKEIVHFFE 131          
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_AQUPY1.129e-2745.99Inorganic pyrophosphatase OS=Aquifex pyrophilus GN... [more]
IPYR_STRCO2.515e-2746.72Inorganic pyrophosphatase OS=Streptomyces coelicol... [more]
IPYR_SULTO4.290e-2747.79Inorganic pyrophosphatase OS=Sulfolobus tokodaii G... [more]
IPYR_SULAC4.290e-2747.01Inorganic pyrophosphatase OS=Sulfolobus acidocalda... [more]
IPYR_BRUSU1.630e-2642.96Inorganic pyrophosphatase OS=Brucella suis GN=ppa ... [more]
IPYR_BRUME1.630e-2642.96Inorganic pyrophosphatase OS=Brucella melitensis G... [more]
IPYR_LEIXX2.781e-2643.80Inorganic pyrophosphatase OS=Leifsonia xyli subsp.... [more]
IPYR_PSEAO4.744e-2647.79Inorganic pyrophosphatase OS=Pseudanabaena sp. (st... [more]
IPYR_METMA8.091e-2645.38Inorganic pyrophosphatase OS=Methanosarcina mazei ... [more]
IPYR_METAC1.057e-2544.35Inorganic pyrophosphatase OS=Methanosarcina acetiv... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
back to top