FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_RICTY (Inorganic pyrophosphatase OS=Rickettsia typhi GN=ppa PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 2 
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            N +IEI   S  +KYE DK+SG I VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAIFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIQELDDLCKMLKKRIVHFFE 139
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAE (Inorganic pyrophosphatase OS=Pseudomonas aeruginosa GN=ppa PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.837e-21
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKE---LPPHRLAEIRRFFED 688
            G   P      IEI    + +KYE+DK +  + VDR + + + YP NYGFIP TL +D DPLDVL++   PV PG  +RA+ +G++ M D+   D K+IAV  D      Y D+KE   LP   L +I+ FFE+
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGGDAKLIAVPHDKLSVL-YKDVKEYTDLPALLLEQIKHFFEN 141
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVY (Inorganic pyrophosphatase OS=Vibrio vulnificus (strain YJ016) GN=ppa PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 2 
Query:  284 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    4 NNVPAGKSLPDDLYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVU (Inorganic pyrophosphatase OS=Vibrio vulnificus GN=ppa PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 2 
Query:  284 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    4 NNVPAGKSLPDDLYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_VIBCH (Inorganic pyrophosphatase OS=Vibrio cholerae GN=ppa PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 2 
Query:  284 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    4 NNVPAGKSLPDDIYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLIPGSVIRCRPVGVLKMTDESGEDAKVVAVPHTKISKEYDHIQDVNDLPALLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_RICPR (Inorganic pyrophosphatase OS=Rickettsia prowazekii GN=ppa PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 2 
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            N +IEI   S  +KYE DK+SG + VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFE 139
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_RHORT (Inorganic pyrophosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ppa PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = 2 
Query:  290 LEIGPGAPKIFNCVIEIGK-GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFF 682
            + +G   P+  N +IEI      VKYE+DK+SG + VDR L++++ YP NYGF+P TL +D DP+DV+++ + PV  G  +R + +G++ M D+  +D+KI+ V      P + + N+  +L P  L  I  FF
Sbjct:    6 IPVGKNPPQDVNVIIEIPLLADPVKYEVDKESGAMFVDRFLHTAMHYPCNYGFVPHTLSDDGDPVDVMVVGRIPVAVGSVMRTRPVGVLYMEDEAGRDEKILGVPHSKLYPYHDNVNNFGDLRPIELRRIEHFF 139
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_RICFE (Inorganic pyrophosphatase OS=Rickettsia felis GN=ppa PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 2 
Query:  323 NCVIEIGKG-SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            N +IEI      +KYE DK+SG + VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE
Sbjct:   16 NVIIEIPMNIGPIKYEFDKESGAVFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVPGSVIKCRAVGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFE 139
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_RICBR (Inorganic pyrophosphatase OS=Rickettsia bellii (strain RML369-C) GN=ppa PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 2 
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            N +IEI   S  +KYE DK+SG + VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D+   D+KIIAV     D  + H  ++ ++       I  FFE
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAVFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVSHHPVVPGSVIKCRAVGVLMMEDESGFDEKIIAVPTSKLDITFDHIKELDDVCEMLKKRIVHFFE 139
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_PSEPK (Inorganic pyrophosphatase OS=Pseudomonas putida (strain KT2440) GN=ppa PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKE---LPPHRLAEIRRFF 682
            G   P      IEI    + +KYE+DK S  + VDR + + + YP NYGFIP TL +D DPLDVL++   PV PG  +RA+ +G++ M D G  D K+IAV   D   + Y D+KE   LP   + +I  FF
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDSDTLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLNMTDDGGGDAKVIAV-PHDKLSQLYVDVKEYTDLPALLIQQIEHFF 139
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_RICTY6.001e-2143.55Inorganic pyrophosphatase OS=Rickettsia typhi GN=p... [more]
IPYR_PSEAE7.837e-2141.79Inorganic pyrophosphatase OS=Pseudomonas aeruginos... [more]
IPYR_VIBVY1.024e-2037.23Inorganic pyrophosphatase OS=Vibrio vulnificus (st... [more]
IPYR_VIBVU1.024e-2037.23Inorganic pyrophosphatase OS=Vibrio vulnificus GN=... [more]
IPYR_VIBCH1.024e-2037.23Inorganic pyrophosphatase OS=Vibrio cholerae GN=pp... [more]
IPYR_RICPR1.024e-2042.74Inorganic pyrophosphatase OS=Rickettsia prowazekii... [more]
IPYR_RHORT1.024e-2038.06Inorganic pyrophosphatase OS=Rhodospirillum rubrum... [more]
IPYR_RICFE1.746e-2041.13Inorganic pyrophosphatase OS=Rickettsia felis GN=p... [more]
IPYR_RICBR1.746e-2041.13Inorganic pyrophosphatase OS=Rickettsia bellii (st... [more]
IPYR_PSEPK1.746e-2042.42Inorganic pyrophosphatase OS=Pseudomonas putida (s... [more]

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Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
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