FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10185 contig Ccv1_Contig10185:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_PASMU (Inorganic pyrophosphatase OS=Pasteurella multocida GN=ppa PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P     VIEI   S  +KYE+DK+SG + VDR + +++ YP NYG++  TL  D DP+DVL+    P+ PG  +R + +G++ M D+   D K++AV       EY H  D+ +LP    A+I+ FFE
Sbjct:    9 GKALPDDIYVVIEIPANSDPIKYEVDKESGALFVDRFMATAMFYPANYGYVNNTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGSDAKVVAVPHSKLTKEYDHIKDVNDLPALLKAQIQHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_ECOLI (Inorganic pyrophosphatase OS=Escherichia coli (strain K12) GN=ppa PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    9 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_ECOL6 (Inorganic pyrophosphatase OS=Escherichia coli O6 GN=ppa PE=3 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K+IAV       EY H  D+ +LP    A+I  FFE
Sbjct:    9 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLIAVPHTKLSKEYDHIKDVNDLPELLKAQIAHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_ECO57 (Inorganic pyrophosphatase OS=Escherichia coli O157:H7 GN=ppa PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    9 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_YERPE (Inorganic pyrophosphatase OS=Yersinia pestis GN=ppa PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK++G + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+++LP    A+I+ FFE
Sbjct:    9 GKDLPEDIYVVIEIPANADPIKYEIDKETGSLFVDRFMSTAMFYPCNYGYINNTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLTKEYDHVKDVQDLPELLKAQIKHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_VIBPA (Inorganic pyrophosphatase OS=Vibrio parahaemolyticus GN=ppa PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ ++P    A+I  FFE
Sbjct:    9 GKSLPEDIYVVIEIPANADPIKYEVDKDSGAVFVDRFMSAPMFYPCNYGYVNNTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKISKEYEHIQDVGDIPELLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_HAEDU (Inorganic pyrophosphatase OS=Haemophilus ducreyi GN=ppa PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P     VIEI   S  +KYE+DK+SG + VDR + +++ YP NYG++  TL  D DP+DVL+    P+ PG  +R + +G++ M D+   D K++AV       EY H  D+ +LP    A+I+ FFE
Sbjct:    9 GKALPDDIYVVIEIPANSDPIKYEVDKESGSLFVDRFMSTAMFYPANYGYVNHTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGGDAKVVAVPHTKLTKEYDHIKDVNDLPALLKAQIQHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_SALTY (Inorganic pyrophosphatase OS=Salmonella typhimurium GN=ppa PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    9 GKELPEDIYVVIEIPANADPIKYEVDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGAVIRCRPVGVLKMTDESGEDAKLVAVPHTKLSKEYDHIKDVNDLPELLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_SALTI (Inorganic pyrophosphatase OS=Salmonella typhi GN=ppa PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 2 
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    VIEI      +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE
Sbjct:    9 GKELPEDIYVVIEIPANADPIKYEVDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGAVIRCRPVGVLKMTDESGEDAKLVAVPHTKLSKEYDHIKDVNDLPELLKAQITHFFE 140
[Close]
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_NEIMB (Inorganic pyrophosphatase OS=Neisseria meningitidis serogroup B GN=ppa PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2 
Query:  317 IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRH-YNDIKELPPHRLAEIRRFF 682
            I N V EI  GS  K E ++K     +DRV  +    P NYGFIP+TL ED D LDVL++ ++P+  G FL A+ IG+M  +D GE DDKI+ V ADD    + Y  + +LP   + +I   F
Sbjct:   17 IINVVNEIPAGSNHKIEWNRKLAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGEVDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHF 139
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_PASMU1.746e-2039.39Inorganic pyrophosphatase OS=Pasteurella multocida... [more]
IPYR_ECOLI1.746e-2039.39Inorganic pyrophosphatase OS=Escherichia coli (str... [more]
IPYR_ECOL61.746e-2040.15Inorganic pyrophosphatase OS=Escherichia coli O6 G... [more]
IPYR_ECO571.746e-2039.39Inorganic pyrophosphatase OS=Escherichia coli O157... [more]
IPYR_YERPE2.280e-2038.64Inorganic pyrophosphatase OS=Yersinia pestis GN=pp... [more]
IPYR_VIBPA2.280e-2037.88Inorganic pyrophosphatase OS=Vibrio parahaemolytic... [more]
IPYR_HAEDU2.280e-2039.39Inorganic pyrophosphatase OS=Haemophilus ducreyi G... [more]
IPYR_SALTY2.978e-2039.39Inorganic pyrophosphatase OS=Salmonella typhimuriu... [more]
IPYR_SALTI2.978e-2039.39Inorganic pyrophosphatase OS=Salmonella typhi GN=p... [more]
IPYR_NEIMB6.635e-2043.09Inorganic pyrophosphatase OS=Neisseria meningitidi... [more]

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Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
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