FC930598

Overview
NameFC930598
Unique NameFC930598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10185 contig Ccv1_Contig10185:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_NEIMA (Inorganic pyrophosphatase OS=Neisseria meningitidis serogroup A GN=ppa PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  317 IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRH-YNDIKELPPHRLAEIRRFF 682
            I N V EI  GS  K E ++K     +DRV  +    P NYGFIP+TL ED D LDVL++ ++P+  G FL A+ IG+M  +D GE DDKI+ V ADD    + Y  + +LP   + +I   F
Sbjct:   17 IINVVNEIPAGSNHKIEWNRKLAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGEVDDKIVCVPADDRNNGNAYKTLADLPQQLIKQIEFHF 139          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BUCAI (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ppa PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFED 688
            G   P     +IEI   S  +KYE+DKKSG++ VDR + + + YP NYG+I  TL  D DPLDVL+    P+   C +  K IG++ M D+   D KIIAV       EY++ NDI ++      +I  FF++
Sbjct:    9 GDDIPNDIYVIIEISSNSSPIKYEVDKKSGMLFVDRFIPTPMFYPCNYGYINHTLSLDGDPLDVLVPSHYPIKSSCVIHCKPIGILNMQDESGDDAKIIAVPKSKICQEYKNINDISDISELLKKQITHFFQN 141          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BUCBP (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ppa PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19
Identity = 57/135 (42.22%), Postives = 75/135 (55.56%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIA-----VCADDPEYRHYNDIKELPPHRLAEIRRFFE 685
            G   P+    +IEI   S  +KYE++K  GL+ VDR +   + YP NYGFI +T   D DPLDVL+    P+LPG  +R K IG++ M D+  +D KIIA     VC    EY   NDI  L P    +I  FF+
Sbjct:    9 GKNIPEDIYVIIEISAHSNPIKYEVNKDLGLLFVDRFIPVPMFYPCNYGFINKTKSNDGDPLDVLVHTPYPILPGSIIRCKPIGVLNMFDESGEDYKIIAIPHPKVCL---EYSSINDICHLSPTLKQQIIHFFK 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_BUCAP (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ppa PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            ++ G   P     +IEI   S  +KYE+DK+SG++ VDR + + + YP NYG+I  TL  D DPLDVL+    P+     +  K +G++ M D+   D KIIAV  D    EY + NDI ++      +I  FF+
Sbjct:    6 IKAGNNIPSDIYVIIEISSNSSPIKYEVDKQSGVLFVDRFIPTPMFYPCNYGYINETLSLDGDPLDVLVPSPYPIQSNVVINCKPVGILKMHDESGNDAKIIAVPNDKVSKEYENINDISDISELLKKQISHFFQ 140          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_THEVO (Inorganic pyrophosphatase OS=Thermoplasma volcanium GN=ppa PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18
Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 2
Query:  311 PKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFE 685
            P+ F  +IEI  GS  KYE  ++   I++DRVL++++ YP NYGF   T  +D DPLDVL+     + PG  +R +AIG+  M D+  +D+KI+AV  D  DP      +  ++P ++  +++ FFE
Sbjct:   10 PESFYVMIEIPMGSNCKYEYKEELDNIVLDRVLFTAMTYPANYGFALDTRGKDGDPLDVLVFSSVSINPGIIVRCRAIGVAEMNDEEGEDNKILAVPVDKVDPASSIVRNESDIPEYQKDKLKHFFE 136          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLPN (Inorganic pyrophosphatase OS=Chlamydia pneumoniae GN=ppa PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  251 MSRRSV-AAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            MS++ +  AHPWH   +     +   C IEI     VK+ELDK +GL+ VDR    S   P  YG +P+T C                   D DPLDV ++ ++ +  G   L+A+ IG + +ID GE DDKIIAV  DD  +    DI + P   L  I+ +F
Sbjct:    1 MSKKPLYVAHPWHSPTLTQDNYESLCCYIEITPYDSVKFELDKATGLLKVDRPQKFSNFCPCLYGLLPQTYCGTASGNYSGEQTRREGIQGDKDPLDVCVLTEKNIHHGNILLQARPIGGLRIIDSGEADDKIIAVLEDDLVFAEIEDISDCPGTVLDMIQHYF 164          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLMU (Inorganic pyrophosphatase OS=Chlamydia muridarum GN=ppa PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17
Identity = 55/155 (35.48%), Postives = 77/155 (49.68%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            HPWH   +     +   C IEI     VK+ELDK++GL+ VDR    S   P  YG +P+T C                   D DPLD+ ++ ++ +  G   L+A+ IG + ++D GE DDKIIAV  DD  Y    DI + P   L  I+ +F
Sbjct:   10 HPWHGPVLTRDDYESLCCYIEITPSDSVKFELDKETGLLKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRDNIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSGEADDKIIAVLEDDLVYGAMEDISDCPGSVLDMIQHYF 164          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLTR (Inorganic pyrophosphatase OS=Chlamydia trachomatis GN=ppa PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  272 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            AHPWH   +     +   C IEI     VK+ELDK++G++ VDR    S   P  YG +P+T C                   D DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F
Sbjct:    9 AHPWHGPVLTRDDYESLCCYIEITPADSVKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYF 164          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLTB (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ppa PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  272 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            AHPWH   +     +   C IEI     VK+ELDK++G++ VDR    S   P  YG +P+T C                   D DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F
Sbjct:    9 AHPWHGPVLTRDDYESLCCYIEITPADSVKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYF 164          
BLAST of FC930598 vs. ExPASy Swiss-Prot
Match: IPYR_CHLTA (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ppa PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  272 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC------------------EDNDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFF 682
            AHPWH   +     +   C IEI     VK+ELDK++G++ VDR    S   P  YG +P+T C                   D DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F
Sbjct:    9 AHPWHGPVLTRDDYESLCCYIEITPADSVKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYF 164          
The following BLAST results are available for this feature:
BLAST of FC930598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
IPYR_NEIMA8.665e-2043.09Inorganic pyrophosphatase OS=Neisseria meningitidi... [more]
IPYR_BUCAI1.132e-1939.85Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]
IPYR_BUCBP4.300e-1942.22Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]
IPYR_BUCAP1.634e-1837.78Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]
IPYR_THEVO2.134e-1838.58Inorganic pyrophosphatase OS=Thermoplasma volcaniu... [more]
IPYR_CHLPN1.383e-1735.98Inorganic pyrophosphatase OS=Chlamydia pneumoniae ... [more]
IPYR_CHLMU1.807e-1735.48Inorganic pyrophosphatase OS=Chlamydia muridarum G... [more]
IPYR_CHLTR2.360e-1735.26Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_CHLTB2.360e-1735.26Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_CHLTA2.360e-1735.26Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]

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Properties
Property NameValue
Genbank descriptionC34009C05EF PostHarvC1 Citrus clementina cDNA clone C34009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930598 ID=FC930598; Name=FC930598; organism=Citrus clementina; type=EST; length=756bp
GCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTGTATCCTTTCT
ANCATTTATAATGGAAGCATATGTTTTATTTGTGAATTGCCCTTTCTTTC
CTTGAT
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