FC930599 | Citrus Genome Database

Overview


Name	FC930599
Unique Name	FC930599
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	735

Libraries


Library Name	Type
PostHarvC1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 121.324 bits (303), Expect = 4.434e-28
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 4.434e-28
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 120.168 bits (300), Expect = 9.788e-28
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 9.788e-28
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.110e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.783 bits (299), Expect = 1.274e-27
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 1.274e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.013 bits (297), Expect = 2.160e-27
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.160e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.013 bits (297), Expect = 2.160e-27
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.160e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.013 bits (297), Expect = 2.160e-27
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.160e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.013 bits (297), Expect = 2.160e-27
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.160e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.013 bits (297), Expect = 2.160e-27
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.160e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 118.627 bits (296), Expect = 2.813e-27
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 2.813e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930599 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 292
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  293 MQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520
            MQIFVKTLTGKT+TLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 118.242 bits (295), Expect = 3.662e-27
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 2

Query:  521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRRKS 715
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +++S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 4 Score: 24.6386 bits (52), Expect = 3.662e-27
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1

Query:  697 HIQKEITLHLVLR 735
            +IQKE TLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of FC930599 vs. ExPASy Swiss-Prot

BLAST of FC930599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	8.184e-36	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	1.823e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	2.381e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	4.062e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	4.062e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	4.062e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	4.062e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	4.062e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	5.305e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	6.928e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	C34009C06EF PostHarvC1 Citrus clementina cDNA clone C34009C06, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930599 ID=FC930599; Name=FC930599; organism=Citrus clementina; type=EST; length=735bp
GAATCGGGTTATTCGATATTCTCAACAAATCTCTCCAATTCTCTCGCTAA
GAAACTTTTAAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACC
ATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTCAAGGCCAA
GATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTGATCTTCG
CCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAATATCCAA
AAGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCATGCAGAT
CTTCGTGAAAACCCTAACCGGCAAGACCGTTACTCTCGAAGTTGAGAGCT
CCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATT
CCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGG
CCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCTCG
TGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCTAACGGGA
AAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACAACGTCAA
GGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGCGTTTGA
TCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTCGCGGATTACACA
TTCAGAAGGAAATCACTCTTCATCTGGTTTTGCGT