FC930602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.389e-43 Identity = 86/227 (37.89%), Postives = 140/227 (61.67%), Query Frame = 3 Query: 99 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 EI+ +Q GQCGNQIG +FW+ +C EHGI +G ++ L+R +V++ +A Y+PRAVL+DLEP ++++ + +++ P+N + GAGNNWA G Y++G +L + V D++ +EA+ D L+GF +CH + ++ + YP +++ TFSVFP+ ++SD VV+PYN+ L++ +L AD +VLDN AL I L + P+F +N Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.389e-43 Identity = 90/235 (38.30%), Postives = 135/235 (57.45%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG-----KYSGDSDLQLERINV----YYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MRE L I GQ G QIG WE+ C EHGI G ++ + ++E +N +++E G++VPR + MDLEP +D +R G + +F P+ V G+ A N +A+G Y+ G+E+I+ VL+ +RK AE C LQGF + + ++ EY ++ L FSV+PSP++S VVEPYNA L+ H +E +D ++DNEALYDIC L + P++ +N Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIGRPSYASIN 235
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG1_XENLA (Tubulin gamma-1 chain OS=Xenopus laevis GN=tubg1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.426e-43 Identity = 84/228 (36.84%), Postives = 139/228 (60.96%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP + S+ + P+ ++ P+N + GAGNNWA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++S VV+PYN+ L++ +L +NAD +VLDN AL I L + P+F +N Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSHVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG2_MOUSE (Tubulin gamma-2 chain OS=Mus musculus GN=Tubg2 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.550e-43 Identity = 83/228 (36.40%), Postives = 140/228 (61.40%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP + S+ + + +++ P+N + GAGNNW +G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + P+F +N Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWGRG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.550e-43 Identity = 84/228 (36.84%), Postives = 140/228 (61.40%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP + S+ + + +++ P+N + GAGNNWA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + P+F +N Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.550e-43 Identity = 84/228 (36.84%), Postives = 140/228 (61.40%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP + S+ + + +++ P+N + GAGNNWA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + P+F +N Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNLIATDRLHIQNPSFSQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.288e-42 Identity = 91/235 (38.72%), Postives = 129/235 (54.89%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS---------GGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MRE L I GQ G QIG WE+ C EHGI G QLE + + AS G++VPRA+ +DLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E+ID VL+ RK AE C LQGF + + ++ EY + L FSV+P+P++S VVEPYN+ L+ H E+ D ++DNEA+YDIC R L + P+ +N Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASIN 235
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.682e-42 Identity = 82/227 (36.12%), Postives = 139/227 (61.23%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG--AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ +Q GQCGNQ+GA +W+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++++ + P+ ++ P+N + G AGNNWA+G Y+ G + + +++++ +EAE D L+GF V H + ++ +++P +++ T+SVFP+ + D VV+PYN+ L++ +LV +AD +VLDN AL I L + TP+F N Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGGDRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTN 228
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 2.197e-42 Identity = 84/227 (37.00%), Postives = 140/227 (61.67%), Query Frame = 3 Query: 99 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 EI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP ++++ + P+ +++ +N + GAGNNWA G +++G ++ + V D++ +EA+ D L+GF +CH + ++ E +P +++ T+SVFP+ ++SD VV+PYN+ L++ +L + AD +VLDN AL I L + TPTF +N Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQIN 229
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.894e-42 Identity = 86/228 (37.72%), Postives = 136/228 (59.65%), Query Frame = 3 Query: 96 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++ + ++ +N + GAGNNWA G Y +G +++D ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LA PTF N Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTN 229 The following BLAST results are available for this feature:
BLAST of FC930602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930602 ID=FC930602; Name=FC930602; organism=Citrus clementina; type=EST; length=771bpback to top |