FC930602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 7.652e-112 Identity = 195/226 (86.28%), Postives = 201/226 (88.94%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREILHIQGGQCGNQIGAKFWEVIC EHG+D TG Y+G S QLERINVY+NEASGGR+VPRAVLMDLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+F DLN Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 3.798e-111 Identity = 191/226 (84.51%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADECMV+DNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 3.798e-111 Identity = 191/226 (84.51%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADECMV+DNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 4.960e-111 Identity = 191/226 (84.51%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+HIQ GQCGNQIGAKFWEVI DEHG+D TG Y GDSDLQLERINVYYNEA+GGRYVPRA+LMDLEPGTMDSVR+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTLKL TPTF DLN Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGVDPTGAYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTFGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB4_MAIZE (Tubulin beta-4 chain OS=Zea mays GN=TUBB4 PE=2 SV=2) HSP 1 Score: 400.208 bits (1027), Expect = 6.478e-111 Identity = 194/228 (85.09%), Postives = 202/228 (88.60%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSD--LQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREILHIQGGQCGNQIGAKFWEVIC EH +D TG+YSG S L+LERINVYYNEA GGRYVPRAVLMDLEPGTM+S+R+GPFG IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+F DLN Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHCVDSTGRYSGTSSQQLELERINVYYNEAGGGRYVPRAVLMDLEPGTMESIRAGPFGGIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 228
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB_EUPCR (Tubulin beta chain OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 8.460e-111 Identity = 191/226 (84.51%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+H+QGGQCGNQIGAKFWEVI DEHG+D TG Y GDSDLQLERINVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 1.443e-110 Identity = 190/226 (84.07%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADECMV+DNEALYDICFRTLKL TPT+ +LN Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGNLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 1.443e-110 Identity = 188/226 (83.19%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+H+QGGQCGNQIGAKFWEVI DEHG+D TG Y GDSDLQLERINVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H I+K+REEYPDRMM T+SVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 398.282 bits (1022), Expect = 2.462e-110 Identity = 190/226 (84.07%), Postives = 202/226 (89.38%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+H+QGGQCGNQIGAKFWEVI DEHG++ TG Y GDSDLQLERINVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVEPTGAYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLN 226
BLAST of FC930602 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 3.215e-110 Identity = 191/226 (84.51%), Postives = 203/226 (89.82%), Query Frame = 3 Query: 93 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFXDLN 770 MREI+HIQGGQCG+QIGAKFWEVI DEHGID TG Y+GDSDLQLER+NVYYNEA+GGRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQV H ISKIREEYPDR+M+TFSV PSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRTLKL TPT+ DLN Sbjct: 1 MREIVHIQGGQCGDQIGAKFWEVISDEHGIDPTGTYNGDSDLQLERVNVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEQCDCLQGFQVTHSLGGGTGSGMGTLLISKIREEYPDRVMMTFSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRTLKLTTPTYGDLN 226 The following BLAST results are available for this feature:
BLAST of FC930602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930602 ID=FC930602; Name=FC930602; organism=Citrus clementina; type=EST; length=771bpback to top |