FC930618

Overview
NameFC930618
Unique NameFC930618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.558e-57
Identity = 110/207 (53.14%), Postives = 148/207 (71.50%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI A +RF  Y+V+PMWPEG+P   + Q IL WQ +TM+MMY+ I +AL   G+E    P++YL FFCLGNREV    +   S  P  P+T  + +++S RFMIYVH+K MIVDDEY+I+GSANINQRSM+G +D+EIAMGAYQP +   R      GQI+G+RMSLW EHLG ++D    PE+++CV+KV +V +
Sbjct:  545 IPKELSLKIVSKIEAGKRFTVYVVLPMWPEGIPESGSVQAILDWQRRTMEMMYKDIIQALQANGIEE--DPRNYLTFFCLGNREVKRDGEYEPSEKPD-PDTDYSRAQESRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGAKDSEIAMGAYQPHHLATREPAR--GQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVAD 746          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.766e-56
Identity = 107/207 (51.69%), Postives = 146/207 (70.53%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I DKI   E+F  Y+V+PMWPEG+P  A+ Q IL WQ +T++MMY+ + +AL   GLE    P++YL FFCLGNREV  + +   +  P  P+T    ++++ RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQ++G+RMSLW EHLG +++ F  P +LEC+ KV  + +
Sbjct:  549 IPKELSLKIVDKIEKGEKFRVYVVVPMWPEGIPESASVQAILDWQRRTLEMMYKDVTQALRAQGLEE--DPRNYLTFFCLGNREVKKEGEYEPAERPD-PDTDYMRAQEARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPAR--GQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIAD 750          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.934e-56
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E+AL+I  KI A ERF  Y+V+PMWPEG+P  A+ Q IL WQ +TM+MMY+ I +AL   G+E    P++YL FFC+GNREV        S  P  P++    ++++ RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RM+LW EHLG +++ F  PE+ ECV KV  + +
Sbjct:  545 IPKELALKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKHIVQALNAKGIEE--DPRNYLTFFCIGNREVKKSGAYEPSETPE-PDSDYIRAQEARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPHHLATREPAR--GQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMAD 746          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.145e-55
Identity = 113/207 (54.59%), Postives = 142/207 (68.60%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP EI+L+I  KI A ERF+ YIVIP+WPEG P  A+ Q IL WQ +TM+MMY  I  AL + GL+   +P+DYL FFCLGNRE     +      P A N+  A +++S RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RDTEIAMGAYQP +  +     P GQI+ +R+SLW EHL    + F  PE+ EC+R V +  +
Sbjct:  553 IPKEISLKIVSKIEAGERFSVYIVIPLWPEGKPGSASVQAILDWQRRTMEMMYTDIIIALRKKGLDA--NPRDYLTFFCLGNREKGKVGEYLPPEKPEA-NSDYARAQESRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATAD 756          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.330e-55
Identity = 107/207 (51.69%), Postives = 145/207 (70.05%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI   E+F  Y+V+PMWPEG+P  A+ Q IL WQ +TMQMMY+ I +AL   GLE    P++YL FFCLGNREV  + +   +  P A ++    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P ++EC+ KV  + +
Sbjct:  547 IPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESASVQAILDWQRRTMQMMYKDIVQALRAQGLEE--DPRNYLTFFCLGNREVKKEGEYEPAERPDADSS-YMKAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPAR--GQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISD 748          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.330e-55
Identity = 106/207 (51.21%), Postives = 143/207 (69.08%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI   E+F  Y+V+PMWPEG+P   + Q IL WQ +TM+MMY+ + +AL   GLE    P++YL FFCLGNREV    +   +  P  P+T    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P +LEC+ KV  + +
Sbjct:  547 IPKELSLKIVSKIEKGEKFRVYVVVPMWPEGLPESGSVQAILDWQRRTMEMMYKDVIQALRAQGLEE--DPRNYLTFFCLGNREVKKDGEYEPAEKPD-PDTDYMRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHRQPAR--GQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISD 748          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 115/209 (55.02%), Postives = 145/209 (69.38%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEY--TWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP EI+L+I +KI A ERFA Y+V+PMWPEG P   + Q IL WQ +TM+MMY  I  AL    +     P+DYL FFCLGNREV    +   +G P    T  A ++K+ RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMGA+QP +  T   + R   GQI+G+RMSLW EHLG + D F  PE+LECV++V  + +
Sbjct:  554 IPREISLKIVNKIEAGERFAVYVVLPMWPEGPPASGSVQAILDWQRRTMEMMYYDIAVALEAKRINA--DPRDYLTFFCLGNREVKLNGEYEPAGRPL-DGTDYAKAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPCHLNTKGLVAR---GQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMAD 756          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 105/207 (50.72%), Postives = 145/207 (70.05%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI A ERFA Y+V+PMWPEG+P  ++ Q IL WQ +T++MMY+ + +AL   G +    P++YL FFCLGNREV    +   +  P  P++    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +      +   GQ+YG+RMSLW EHLG + D F +PE+ EC+ KV  + +
Sbjct:  546 IPKELSLKIVSKIEAGERFAVYVVVPMWPEGIPESSSVQAILDWQKRTIEMMYKDVVQALRAKGSDE--DPRNYLTFFCLGNREVKKSGEYEPAEQPE-PDSDYQRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYH--LANTQPARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIAD 747          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.566e-49
Identity = 110/228 (48.25%), Postives = 145/228 (63.60%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLG---YIED-CFGQPETLECVRKVRSVGEN-----TGSSLLQMINL 658
            IP+EIAL+IA KIRA ERFA YIVIPMWPEG P     + IL W  +TM MMY+ I +A+ EVG +    P+DYLNFFCL NRE     +     +P    T    ++++ RFM+YVHSK MIVDD Y+++GSANINQRSM+G RDTEIA+G YQ          +   +I  YR+SLW EH G     +D    +PE+LECVR +R++GE      +G  ++ M+ +
Sbjct:  501 IPVEIALKIAAKIRARERFAVYIVIPMWPEGPPESETVEEILHWTRETMSMMYQIIGEAIWEVGDKS--HPRDYLNFFCLANREEKRDGEFEAVSSP-HQKTHYWNAQRNRRFMVYVHSKLMIVDDTYILIGSANINQRSMDGCRDTEIAIGCYQ-------TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIGEQMWEIYSGDKVVDMLGI 718          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDP1_ARATH (Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 2
Query:   38 IRAHER---FAAYIVIPMWPE---GVP-TGAATQR-ILFWQHKTMQMMYETIYKALVE-VGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPY--GQI-YGYRMSLWAEHLG 553
            +RAH     F   +VIP+ P    G+  +GAA+ R I+ WQ++T+   + +I   L   +G++      DY++F+ L     + +            + P A S+      +YVHSK MIVDD   ++GSANIN RS+ G+RD+EI +     E   +RM   P+  G+     R+SLW+EHLG
Sbjct:  805 LRAHNEKKIFRVVVVIPLLPGFQGGIDDSGAASVRAIMHWQYRTIYRGHNSILTNLYNTIGVKA----HDYISFYGLRAYGKLSE------------DGPVATSQ------VYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSLWSEHLG 966          
The following BLAST results are available for this feature:
BLAST of FC930618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PLDA1_PIMBR3.558e-5753.14Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA2_BRAOC1.766e-5651.69Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_TOBAC3.934e-5653.62Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDZ1_ARATH1.145e-5554.59Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDA1_BRAOC3.330e-5551.69Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA1_ARATH3.330e-5551.21Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA2_ORYSJ5.680e-5555.02Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDA1_VIGUN5.680e-5550.72Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDE1_ARATH3.566e-4948.25Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]
PLDP1_ARATH1.415e-1334.24Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP... [more]

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Properties
Property NameValue
Genbank descriptionC34009E02EF PostHarvC1 Citrus clementina cDNA clone C34009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930618 ID=FC930618; Name=FC930618; organism=Citrus clementina; type=EST; length=706bp
GATTCCGATGGAAATTGCGCTCCAGATTGCTGATAAGATCAGAGCACATG
AGCGATTTGCTGCCTATATAGTTATTCCAATGTGGCCGGAAGGCGTTCCA
ACTGGTGCTGCTACACAAAGAATTTTATTTTGGCAGCACAAAACTATGCA
AATGATGTATGAGACAATCTACAAGGCATTAGTTGAGGTGGGGCTTGAGG
GTGCATTCTCACCGCAGGACTATTTGAACTTTTTCTGTCTGGGCAATCGT
GAGGTCATTGATCAAACTGACACTTCATTGTCTGGAAATCCAACAGCTCC
GAACACTCCTGAGGCCCTAAGTAGGAAGAGTGGACGATTCATGATTTATG
TTCATTCAAAAGGGATGATTGTTGATGATGAGTATGTGATACTGGGGTCT
GCAAACATCAATCAGCGCTCCATGGAGGGCACAAGAGACACAGAAATTGC
AATGGGAGCCTACCAACCTGAATATACTTGGGCTAGAATGAAACGTCATC
CTTATGGACAGATCTATGGATATAGAATGTCGCTATGGGCAGAACATCTT
GGATACATTGAGGACTGCTTCGGACAACCCGAGACTCTGGAATGTGTAAG
AAAGGTTAGATCAGTAGGCGAGAATACTGGCAGCAGTTTGCTGCAGATGA
TCAATCTGAAATGAGGAGCCACCTTATAAAGTACCAGTTGAAGTGGATCG
AAAAGG
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