FC930619

Overview
NameFC930619
Unique NameFC930619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:51..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus kaustophilus GN=iolA2 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 58/167 (34.73%), Postives = 84/167 (50.30%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W     G T +  NPA  + +A V  +S E+ +E ++A  EA K W + P P+R  ++ +    L E    L RL+++E GK   E  GEVQ  I+  +FA G    + G  +P             P+GVVG IT FNFP  V  W   +A+ CGN  V K
Sbjct:   11 YIGGQWVESRSGKTEAVPNPATGEVLAYVPISSREELDEAVRAAKEAFKTWRKTPVPRRARILFKYQQLLVEHWEELARLVTLENGKSYNEAYGEVQRGIECVEFAAGAPTLMMGRQLPDIATGIESGMYRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLK 177          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA_BACHD (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus halodurans GN=iolA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20
Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            F+ G+W     G T +  NPA  + +A V  ++ ED +  +    EA K W + P P+R  V+ +    L E    L RL+++E GK   E  GEVQ  I+  +FA G    + G  +P    N        P+GVVG IT FNFP  V  W   +A+ CGN  V K
Sbjct:   13 FIGGQWVESDSGKTEAVPNPATGEILAHVPISNREDLDRAVSVAKEAFKTWGKTPVPRRARVLFKYQQLLVENWEELARLVTLENGKSYKEAYGEVQRGIECVEFAAGAPSLMMGKQLPDIATNIESGMYRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLK 179          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 672
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K + T
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 61/170 (35.88%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  166 FVNGKW--KAHGPTVSSINPANNQKIATVVEAS-LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666
            ++NG W          SINPAN   I   V+ S LED  E + A +EA   W +    +RGE + +    L + L  +   ++ EMGK L E   E    + +  +  G   +  G VIPS     ++  T  PLGVVGVI+ +NFP A+  W    ALV GN VV K A
Sbjct:   13 YINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSGVERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIGDVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPA 182          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA_LACCA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Lactobacillus casei GN=iolA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  166 FVNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            F+NGKW  A   T  ++ NPA    +A V  ++ ED  + + A  EA KIW ++  PKR +++ +    L E    LGR+++ E GK L E + EV   I+  +FA G+   + G  + S   +        P+GVVG IT FNFP  V  W   +A+  GN  + K
Sbjct:   14 FINGKWVDAKTETFENVYNPATGDVLARVPHSTSEDVADAVTAAKEAFKIWQKVSIPKRAKILFKYQQLLVEHQEELGRIVTEENGKSLDEAVAEVGRGIENVEFAAGVPTLMMGDSLSSVATDVEATNYRYPIGVVGGITPFNFPMMVPCWMFPMAVATGNTFILK 180          
The following BLAST results are available for this feature:
BLAST of FC930619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
IOLA2_GEOKA3.478e-2034.73Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACHD4.543e-2035.33Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_ACIBY7.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT7.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS7.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC7.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB57.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB37.749e-2031.98Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
ALDH_BACST7.749e-2035.88Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
IOLA_LACCA2.945e-1934.73Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionC34009E03EF PostHarvC1 Citrus clementina cDNA clone C34009E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930619 ID=FC930619; Name=FC930619; organism=Citrus clementina; type=EST; length=707bp
GATTCCAACACACTTTCATGTGACATTGTCTTACATAACTAATCTTTTTT
CAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAAAGATGG
AATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGATCGGCTTAAGTCCA
GAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGGCACATGGTCCTAC
TGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATTGCTACTGTTGTGG
AGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGCTTGCAGCGAAGCA
TCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAGGGGAGGTTGTTAG
ACAAATAGGTGATGCATTGAGAGAAAAACTGCATCATCTCGGCCGTCTTC
TTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTCCAA
GAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAAGCCGGCAACTTAA
TGGATCAGTAATACCTTCAGAACGTCCCAATCATATGATGTTAGAGACAT
GGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATTTAACTTCCCGTGT
GCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGT
TGTTTGGAAAGGTGCTCCAACACTCCTTTGATCACATAGCAATAACAAGC
TGGTGTC
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