FC930619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 48/173 (27.75%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 166 FVNGKWK--AHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEA---SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 F+N +W+ G NPA +++ V EA D ++ ++A A +W + A +RG ++ ++ D + L + S+ GK L ++Q VI + G + +++G IP + ++ P+GV G I +NFP + W AL CGN VV K A Sbjct: 41 FINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDG-DYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPA 212
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 48/173 (27.75%), Postives = 79/173 (45.66%), Query Frame = 1 Query: 166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 F+N +W G +NPA + I V E D ++ +KA +A +I W + A +RG ++ ++ D + L + +I GK+ + ++ I + G + +++G IPS+ P+GV G I +NFP + W AL CGN VV K A Sbjct: 24 FINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRR-EPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPA 195
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 48/173 (27.75%), Postives = 78/173 (45.09%), Query Frame = 1 Query: 166 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 F+N +W G NPA +K+ V E ED + + A +A +I W + A +RG ++ ++ D + L + S+ GK+ + ++ + + G + ++ G IPS+ N P+GV G I +NFP + W AL CGN VV K A Sbjct: 23 FINNEWHDSVSGKKFPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAFQIGSPWRTMDASERGRLLYKLADLVERDRLILATMESMNGGKLFSNAYLMDLGGCLKTLRYCAGWADKIQGRTIPSDG-NFFTYTRHEPVGVCGQILPWNFPLLMFLWKIAPALSCGNTVVVKPA 194
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 48/173 (27.75%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 166 FVNGKWKAH--GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 F+N +W + G NPA +K+ V E ED ++ +KA +A +I W + A +RG ++ ++ D + L + ++ GK+ + ++ I + G + ++ G IP + N P+GV G I +NFP + W AL CGN VV K A Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDG-NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 44/174 (25.29%), Postives = 79/174 (45.40%), Query Frame = 1 Query: 160 GCFVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 G F+N + HG V +P+ + I V +A ED + +K A + W + + +RG + ++ D + + L +L + +++ GK + G+VQ D + G + + G I ++ P+GV G I +NFP + W A+ CGN ++ K A Sbjct: 24 GLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWADKDYGQTIETDI-KRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTA 196
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: SSDH_PANTR (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 46/167 (27.54%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 166 FVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 FV G+W T +PA+ + V + + + ++A EA W E+ A +R ++R+ + + + L R+++ E GK L E GE+ ++ +R++ G +I + + L P GV VIT +NFP A++ AL G VV K A Sbjct: 64 FVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPXGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPA 230
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 45/171 (26.32%), Postives = 78/171 (45.61%), Query Frame = 1 Query: 166 FVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI------PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660 +VNG+WK + PA +++ +V S E+ + + A K W L +R E + + D L +G +LS E+ K +GEV ++ ++A +L G V+ P+ + ++ P+G+V I+ FN+P + G AL+ GN V K Sbjct: 8 YVNGEWKLSKEEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKAWRALSYVERAEYLHKAADILMRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRLEGEVLEGGSFDPASKKKIAIVRR-EPVGLVLAISPFNYPINLAGSKIAPALISGNVVALK 177
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: ASTD_CHRVO (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Chromobacterium violaceum GN=astD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 166 FVNGKWKA-HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660 F++GKW A G ++ NPA+N + AS + ++A A W + +R +VVR+ G+ L E+ L R+++ E GK L E EV ++ D ++ + G + +L P GVV V +NFP + + AL+ GN V++K Sbjct: 5 FIDGKWLAGDGEAMAKTNPADNAPLWQGRAASAAQVDAAVRAARAAFPAWARMGLEERAKVVRRFGERLTERKAELARVIAQETGKPLWEATTEVTTMVGKIDISLKALAERTGERAAAMGDAQAVLRH-KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVIFK 169
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 51/182 (28.02%), Postives = 83/182 (45.60%), Query Frame = 1 Query: 145 SPETPG--CFVNGKWK--AHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 666 +P+ P F++ KW T +++PA + I V E D + KA A ++ W + A KRG ++ + D + +L L S++ GK E + ++ EVI + + G + + +G IP + H P+GV I +NFP + W +AL GN VV K A Sbjct: 25 NPDIPDNQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDG-EHFCFTRHEPVGVCCQIIPWNFPLVMQSWKLALALAMGNTVVTKVA 205
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: ABDH_SALPA (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi A GN=ydcW PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 48/168 (28.57%), Postives = 74/168 (44.05%), Query Frame = 1 Query: 160 GCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660 G V+G+ G S NPA + I + EAS + ++A W + R E + ++ D++ + RL S GK L I E+ ++D+ F G +R L+G H + +P+GVV I +N+P + W AL GNCVV K Sbjct: 9 GVLVDGE----GERQSVYNPATGEVILEIAEASPAQIDAAVQAAVNTFAEWGQTTPKARAECLLKLADSIEQNALEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIK 172 The following BLAST results are available for this feature:
BLAST of FC930619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930619 ID=FC930619; Name=FC930619; organism=Citrus clementina; type=EST; length=707bpback to top |