FC930619

Overview
NameFC930619
Unique NameFC930619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:51..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA1_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis subsp. konkukian GN=iolA1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA1_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus cereus (strain ZK / E33L) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus anthracis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  199 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            T  SINPAN + +A +  AS ED E  + A  +  KIW  + A +R  ++R+  D LRE+   L  L +++ GK + E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   23 TFDSINPANGEVLAKIQRASKEDVERAVVAAEKGQKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  199 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            T  SINPAN + +A V EA   D E  +++  +  +IW  L   +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  IP  R +  +     PLGVV  I A+N+P  +  W A  AL  GN +++K
Sbjct:   23 TFESINPANGEVLAEVAEAGAADLERAVESAEQGQRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKAAPALAAGNAMIFK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA_BACCR (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAFETWSKVPVPNRSRNLYKYLQLLQENKDELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA_BACC4 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain B4264) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAFETWSKVPVPNRSRNLYKYLQLLQENKDELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA_BACC2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain G9842) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  169 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAFETWSKVPVPNRSRNLYKYLQLLQENKDELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  193 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            G T  ++NPA  + IA V  AS  D E  +++ SE  K+W  + A +R  ++R+  + LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +V+K
Sbjct:   21 GKTFKTVNPATGEVIAEVQVASQADVERAVQSASEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPL-RESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFK 176          
The following BLAST results are available for this feature:
BLAST of FC930619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
IOLA1_BACHK6.140e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACCZ6.140e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAN6.140e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAH6.140e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSESM6.140e-1732.90Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSEU58.019e-1732.90Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
IOLA_BACCR1.047e-1631.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC41.047e-1631.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC21.047e-1631.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_STRMK1.047e-1631.85Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]

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Properties
Property NameValue
Genbank descriptionC34009E03EF PostHarvC1 Citrus clementina cDNA clone C34009E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930619 ID=FC930619; Name=FC930619; organism=Citrus clementina; type=EST; length=707bp
GATTCCAACACACTTTCATGTGACATTGTCTTACATAACTAATCTTTTTT
CAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAAAGATGG
AATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGATCGGCTTAAGTCCA
GAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGGCACATGGTCCTAC
TGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATTGCTACTGTTGTGG
AGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGCTTGCAGCGAAGCA
TCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAGGGGAGGTTGTTAG
ACAAATAGGTGATGCATTGAGAGAAAAACTGCATCATCTCGGCCGTCTTC
TTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTCCAA
GAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAAGCCGGCAACTTAA
TGGATCAGTAATACCTTCAGAACGTCCCAATCATATGATGTTAGAGACAT
GGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATTTAACTTCCCGTGT
GCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGT
TGTTTGGAAAGGTGCTCCAACACTCCTTTGATCACATAGCAATAACAAGC
TGGTGTC
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