FC930619

Overview
NameFC930619
Unique NameFC930619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:51..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA2_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus thuringiensis subsp. konkukian GN=iolA2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  166 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   PKR  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVLAANEAFKSWSKTAVPKRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  166 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   PKR  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKGDVEQAVLAANEAFKSWSKTAVPKRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  166 FVNGKWKA--HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G++ A   G T  SINPA  + +A V  AS  D +  + + +E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPL-RESSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA3_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Bacillus cereus (strain ZK / E33L) GN=iolA3 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  166 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   PKR  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVLAANEAFKSWSKTAVPKRARILFKYQQLLVDNWEDLAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA2_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  166 FVNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W ++    V  + NPA  + IA V  ++ ED +  +    EA K W ++  P+R  ++ +    L E    L +L+++E GK   E  GEVQ  I+  +FA G    + G  +P             P+GV+  IT FNFP  V  W   +A+ CGN  V K
Sbjct:   10 YIGGQWIESTSKQVEDVPNPATGEIIARVPLSTKEDLDRAVATAKEAFKTWRKVAVPRRARILFRYQQLLIENWEGLAKLVTLENGKSYKEAYGEVQRGIECVEFAAGAPTLMMGEQLPDIATGVESGMYRYPIGVIAGITPFNFPMMVPCWMFPLAIACGNTFVLK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus anthracis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  166 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   P+R  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVLAANEAFKSWSKTAVPRRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 178          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  199 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            T  +INPAN + +A +  A  ED E  + A  +  KIW  + A +R  ++R+  D LRE+   L  L +++ GK + E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   23 TFDAINPANGEVLAQIQRAGKEDVERAVVAAEKGQKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: IOLA1_BACSK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus clausii (strain KSM-K16) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  166 FVNGKWKAHGPTVSS--INPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            ++NGKW     ++    +NPA  + I  V  ++  D E  ++A   A   W ++  P+R  ++      L+     L RL++IE GK L E  GEVQ  I+  +FA G    + G  +P    +        P+GVVG I  FNFP  V  W   +A+  GN  + K
Sbjct:   14 YINGKWIESSTSLYEDVVNPATKEVICQVPLSTKADVEYAVEAAKTAFAKWSKVAVPRRARILFNYQQLLQRDKEELARLITIENGKNLTEARGEVQRGIENVEFAAGAPSLMMGDSLPMIATDVEASNYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNAFLLK 180          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  193 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            G T  ++NPA    IA V  AS  D E  +++ +E  K+W  + A +R  ++R+  + LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +V+K
Sbjct:   21 GKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPL-RESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFK 176          
BLAST of FC930619 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  166 FVNGKWKAHGP--TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 660
            +++G +   G   T  +INPAN + +A V  A+ ED E  + +  +  KIW  + A +R  ++R+  D LRE+   L  L +++ GK   E    +V    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIDGGYSDAGSDATFEAINPANGEVLAQVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETQYVDVVTGADVLEYYAGLVPAIEGEQIPL-RDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
The following BLAST results are available for this feature:
BLAST of FC930619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
IOLA2_BACHK1.368e-1632.34Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACAH1.368e-1632.34Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEMY1.368e-1630.95Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
IOLA3_BACCZ1.786e-1632.34Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACWK1.786e-1631.14Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACAN3.047e-1631.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSE143.980e-1631.61Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
IOLA1_BACSK5.198e-1631.14Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_STRM55.198e-1631.21Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_PSEFS6.788e-1630.95Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]

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Properties
Property NameValue
Genbank descriptionC34009E03EF PostHarvC1 Citrus clementina cDNA clone C34009E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930619 ID=FC930619; Name=FC930619; organism=Citrus clementina; type=EST; length=707bp
GATTCCAACACACTTTCATGTGACATTGTCTTACATAACTAATCTTTTTT
CAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAAAGATGG
AATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGATCGGCTTAAGTCCA
GAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGGCACATGGTCCTAC
TGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATTGCTACTGTTGTGG
AGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGCTTGCAGCGAAGCA
TCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAGGGGAGGTTGTTAG
ACAAATAGGTGATGCATTGAGAGAAAAACTGCATCATCTCGGCCGTCTTC
TTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTCCAA
GAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAAGCCGGCAACTTAA
TGGATCAGTAATACCTTCAGAACGTCCCAATCATATGATGTTAGAGACAT
GGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATTTAACTTCCCGTGT
GCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGT
TGTTTGGAAAGGTGCTCCAACACTCCTTTGATCACATAGCAATAACAAGC
TGGTGTC
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