FC930630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 147 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYR 174
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 147 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYR 174
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 147 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+ Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYR 174
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 75/183 (40.98%), Postives = 102/183 (55.74%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYK 665 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQ 179
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 83/184 (45.11%), Postives = 104/184 (56.52%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPT---LVPLLGIDVWEHAYYLQYK 665 TLP+L Y Y ALEP M++HH KHHQAYV N N A+E L Q L K+ +L AI+ N GGH+NHS+FWK+L G +L AI FGS+EA + A GSGW WL L E +L V +TANQD P++ KA PLLG+DVWEHAYYL+++ Sbjct: 4 TLPELGYAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLT-AIRNNVGGHLNHSLFWKSLKK-----GTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAWLVLQ-ENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQ 180
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 75/183 (40.98%), Postives = 102/183 (55.74%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYK 665 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYYL+++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQ 179
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = 3 Query: 147 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ + NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYYL Y+ Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQTLINNGGGHLNHALFWELLSPEK----QDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYR 174
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29 Identity = 74/183 (40.44%), Postives = 102/183 (55.74%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYK 665 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + N + +L + ++ N GGH NHS+FWK L G L AI+ FGS++ + A+ GSGW WL L + +L V +TANQD PL+ +A + P++G+DVWEHAYYL+++ Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQ 179
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29 Identity = 72/178 (40.45%), Postives = 103/178 (57.87%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--FQALNKVDTSTVV-----QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 L LPY Y ALEP I MQLHH KHH AYV N N A+E+ Q+++ D T + ++ ++ N GGHVNH++FW+ + G P ++ AI+ FGS +A Q+ + G GSGWVWL + ++ L + +T NQD + + T P++G DVWEHAYYL+Y+ Sbjct: 5 LKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMG---ANGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWL-VRSQQGDLQILSTPNQDSPLIEGHT--PIMGNDVWEHAYYLKYQ 176
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 77/187 (41.18%), Postives = 105/187 (56.15%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK-----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYK 665 +LP LPY Y ALEP + M++HH KHHQ YV N N +VE L + L+KV + + ++ N GGH NHS+FWK L G L AI+ FGS+++ +K A A GSGW WL L + K L V +TANQD PL+ +A + P++G+DVWEHAYYL+++ Sbjct: 4 SLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLESFPELAKFSVEDLIKDLDKVP----AEKRTFMRNNAGGHANHSLFWKGLKL-----GTTLTGDLKAAIERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKDDGK-LAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQ 180 The following BLAST results are available for this feature:
BLAST of FC930630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930630 ID=FC930630; Name=FC930630; organism=Citrus clementina; type=EST; length=707bpback to top |