FC930630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRAY (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus alactolyticus GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 195 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 629 I E M LHH KHH Y+ N N A+E+ + ++ T ++ A+ NGGGH+NH++FW+ L P + EP L AI+ FGS E + GSGW WL ++ E K L V +T NQD +++ P+LG+ Sbjct: 2 IDKETMILHHDKHHATYLANANAALEKHPEIGEDLEFLLSDVTRIPEDIRQALINNGGGHLNHALFWELLTPEKQ---EPTAEVLA-AIEDAFGSFEDFKTAFTQAATTRFGSGWAWLVVNQEGK-LEVMSTGNQDNPISQGKQ--PILGL 145
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODF_AQUAE (Superoxide dismutase [Fe] OS=Aquifex aeolicus GN=sodB PE=3 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 58/164 (35.37%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 195 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 IS E ++ H + H++ YV YN+ E+L N D S Q L+ FN G V H +++ LAP GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YK Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLAP---GGKGEPSEALKKKIEEDLGGLDACTNELKA--AAIAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYK 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODF_AQUPY (Superoxide dismutase [Fe] OS=Aquifex pyrophilus GN=sodB PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 57/164 (34.76%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 195 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 IS E ++ H + H++ YV YN+ E+L N D S Q L+ FN G V H +++ L P GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY+ YK Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLTP---GGKGEPSEALKKKIEEDIGGLDACTNELKA--AAMAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYYVDYK 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_HALHI (Superoxide dismutase [Mn] (Fragment) OS=Haloarcula hispanica GN=sod PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 48/140 (34.29%), Postives = 60/140 (42.86%), Query Frame = 3 Query: 243 YVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 662 YV A E L + D + G + NG GH H++FW+N+ P GGGEP L I+ FGS E K E AA GW L D K+L D P+L +DVWEH+YY Y Sbjct: 2 YVNGLESAEETLAENRESGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEG--WKGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDY 134
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM2_HALME (Superoxide dismutase [Mn] 2 (Fragment) OS=Halobacterium mediterranei GN=sod2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 46/141 (32.62%), Postives = 64/141 (45.39%), Query Frame = 3 Query: 243 YVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 662 YV N A E L + + D ++ NG GH H +FW+ + P GGG P L I++ FGS E + E A+ GW L D K+L + + D + A P+L +DVWEH+YY QY Sbjct: 2 YVNGLNAAEETLRENRSSGDMDGSAAAMRSVSHNGCGHYLHHLFWRCMTP--NGGGGEPTGDLRDRIESDFGSYEGW-EAEFREAASWPAGGWALLVYDPVTKQLRNLAVQKHNDGALWSAH---PILALDVWEHSYYFQY 136 The following BLAST results are available for this feature:
BLAST of FC930630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930630 ID=FC930630; Name=FC930630; organism=Citrus clementina; type=EST; length=707bpback to top |