FC930630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34 Identity = 80/178 (44.94%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 LP+LPY Y ALEP I E M +HH KHH YVTN NKAVE NK V L A++ NGGGH NH +FW L+P GGGEP +L I++ FGS + ++ +A A GSGW WL ++ +L + +T NQD +++ T P+LG+DVWEHAYYL Y+ Sbjct: 5 LPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSP--NGGGEPT-GALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNN--GKLEITSTPNQDSPLSEGKT--PILGLDVWEHAYYLNYQ 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_PIG (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Sus scrofa GN=SOD2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34 Identity = 78/147 (53.06%), Postives = 94/147 (63.95%), Query Frame = 3 Query: 195 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 635 I+ +IMQLHH +HH AYV N N E+ +AL K D + V LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL LVPLLGIDV Sbjct: 2 INAQIMQLHHSEHHAAYVNNLNVVEEKYQEALKKGDVTAQVALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLVPLLGIDV 144
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.527e-34 Identity = 79/182 (43.41%), Postives = 107/182 (58.79%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 LP+LPY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NGGGH NH+ FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+ Sbjct: 6 LPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNGGGHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNN--GELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQ 176
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34 Identity = 80/182 (43.96%), Postives = 106/182 (58.24%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 TLP LPY Y ALEP I + M++HH KHHQ YV N A VE+L A+ ++ S L+GA+ +GGGH NHS+FW ++P +GGGE PH L AI + G +A + + GSGW WL + T K LVVE++ NQD + T P+ G+DVWEHAYYL+Y+ Sbjct: 4 TLPALPYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEWPVEKLVGAVKQLPES----LRGAVTNHGGGHANHSLFWTVMSP--QGGGE-PHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSV-TPQKTLVVESSGNQDSPLMFGNT--PIFGLDVWEHAYYLKYQ 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34 Identity = 74/181 (40.88%), Postives = 110/181 (60.77%), Query Frame = 3 Query: 144 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V +++GA++ +GGGH NH++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ T P+LG+DVWEHAYYL+++ Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNN--GKLEIVSTANQDSPLSEGKT--PVLGLDVWEHAYYLKFQ 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33 Identity = 84/187 (44.92%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 150 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYK 665 TLP LPY Y ALEP I M++HH KHHQ YV N NKA VEQL Q L++V +GA++ N GGH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + + +L V +TANQD PL+ +A V P+LG+DVWEHAYYL Y+ Sbjct: 4 TLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADK----KGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQ 184
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33 Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--FQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYK 665 LP LPYDY +LEP + M +HH KHHQ YV N N A+++ + L VD + V + I+ NGGGH NHS FWK + G P+ + AI+ FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+ Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLNAALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPD-GSLSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQ 185
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33 Identity = 80/178 (44.94%), Postives = 100/178 (56.18%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 LP LPY Y ALEP I E M +HH KHH YVTN N A+E NK + L+ A++ NGGGH NHS+FW L+P GGGEP L AI+ FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+ Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSP--NGGGEPT-GELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVNN--GELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQ 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33 Identity = 80/178 (44.94%), Postives = 100/178 (56.18%), Query Frame = 3 Query: 153 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 LP LPY Y ALEP I E M +HH KHH YVTN N A+E NK + L+ A++ NGGGH NHS+FW L+P GGGEP L AI+ FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+ Sbjct: 5 LPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSP--NGGGEPT-GELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVNN--GELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQ 175
BLAST of FC930630 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 147 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 665 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY++Y+ Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYR 174 The following BLAST results are available for this feature:
BLAST of FC930630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930630 ID=FC930630; Name=FC930630; organism=Citrus clementina; type=EST; length=707bpback to top |