FC930631

Overview
NameFC930631
Unique NameFC930631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15190 contig Ccv1_Contig15190:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.445e-71
Identity = 132/235 (56.17%), Postives = 168/235 (71.49%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +E K  L+KIRG + ++ E+  +V A  IA++VK P+  L+K  +RP  VI + LQ FQQ TGINAIMFYAPVLF+T+GFG  A+L S V+TG +NVLST V I+ VDK GRR LLL++ + M + Q VI IIL  K  D +  L    A++VVI +C ++  FAWSWGPLGWLIPSETFPLETR+ G ++ V  N+ FTFVIAQAFLSMLC  K GIF FFSGW+++M  F  F
Sbjct:  233 KEGKETLKKIRGVEDVDEEYESIVHACDIARQVKDPYTKLMKPASRPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTVGFGNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILA-KDLDVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRTEGFALAVSCNMFFTFVIAQAFLSMLCAMKSGIFFFFSGWIVVMGLFALF 466          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.695e-70
Identity = 125/236 (52.97%), Postives = 170/236 (72.03%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV-KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            EE K +L+KIRG D ++ EF +L++A   AK+V++P++N+++ + RP L+   A+  FQQ TGIN IMFYAPVLFKTLGFG  A+L S VITG VN+LST VSIY+VD+ GRR+L LE GIQMF+ Q ++   +G +     +  L    A  ++  IC +++ FAWSWGPLGWL+PSE  PLE R AGQ++ V VN+ FTF+I Q FL+MLCH KFG+F FF+  V IM+ F++F
Sbjct:  237 EEAKQMLKKIRGADNVDHEFQDLIDAVEAAKKVENPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFASMVAIMTVFIYF 472          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.826e-70
Identity = 129/238 (54.20%), Postives = 172/238 (72.27%), Query Frame = 3
Query:    3 FEETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKR-RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV-KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +E+ + +L+KIRG D ++ EF +L +A   AK+V +P++N+ ++ + RP LV   A+  FQQ TGIN IMFYAPVLFKTLGF   ASL S VITGAVNV+STLVSIY+VD+ GRR+L LE GIQM +SQ V+  ++G+K     S  L    A  ++  IC +++ FAWSWGPLGWL+PSE  PLE R AGQ++ V VN+ FTF+I Q FL+MLCH KFG+F FF G V +M+ F++F
Sbjct:  236 YEQAREMLQKIRGADNVDEEFQDLCDACEAAKKVDNPWKNIFQQAKYRPALVFCSAIPFFQQITGINVIMFYAPVLFKTLGFADDASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYF 473          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.335e-69
Identity = 120/235 (51.06%), Postives = 175/235 (74.47%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV-KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            EE K +L+ IRGT++++ EF +L++AS  +K+VKHP++N++  R RPQL++   +  FQQ TGIN I FYAPVLF+TLGFG  ASL S ++TG + +L T VS+++VD+ GRR+L L+ GIQM +SQ  I  ++G+K     + ++    A L+V +IC +++ FAWSWGPLGWL+PSE  PLE RSA Q++ V VN+ FTF++AQ FL+MLCH KFG+F FF+ +V+IM+ F++
Sbjct:  235 EEAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIMLPRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIY 469          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.714e-63
Identity = 117/234 (50.00%), Postives = 165/234 (70.51%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASRIAKE--VKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +AVL ++R T+ ++ EF ++  A+  +    ++  +  L  R+  P L++   + + QQ TGINAIMFY PVLF + G    A+L +TVI GAVNV +T VSI+SVDK GRR L LE GIQMF+ Q V A +LG+++  +  +L +  A  V+++IC +++AFAWSWGPLGWL+PSE   LETR AG S+ V VN LF+FVI QAFLSM+C  ++G+FLFF+GWV+IM+ FV+F
Sbjct:  244 RAVLARLRRTEAVDTEFEDICAAAEESTRYTLRQSWAALFSRQYSPMLIVTSLIAMLQQLTGINAIMFYVPVLFSSFGTARHAALLNTVIIGAVNVAATFVSIFSVDKFGRRGLFLEGGIQMFIGQVVTAAVLGVELNKYGTNLPSSTAAGVLVVICVYVAAFAWSWGPLGWLVPSEIQTLETRGAGMSMAVIVNFLFSFVIGQAFLSMMCAMRWGVFLFFAGWVVIMTFFVYF 477          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.407e-61
Identity = 112/233 (48.07%), Postives = 163/233 (69.96%), Query Frame = 3
Query:    9 ETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKD-HSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFV 704
            +T+ +LR++RGT+ ++ E  +LVEAS  +    + F  LL+R+ RP+LV+A+ +  FQQ TGIN + FYAPVL++T+GFG S SL ST++TG V   STL+S+  VD++GR+ L L  G+QM +SQ  I +I  + V D H   +  G+   VV+++C +++ F WSWGPLGWL+PSE FPLE RS  QSVTV V+ +FTF +AQ+   MLC F+ GIF F+ GW+++M+  V
Sbjct:  242 KTELMLRRVRGTNDVQDELTDLVEASSGSDTDSNAFLKLLQRKYRPELVMALVIPFFQQVTGINVVAFYAPVLYRTVGFGESGSLMSTLVTGIVGTSSTLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVI--VMVADVHDGVIKEGYGYAVVVLVCVYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVSFVFTFAVAQSAPPMLCKFRAGIFFFYGGWLVVMTVAV 472          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.401e-61
Identity = 120/238 (50.42%), Postives = 164/238 (68.91%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEV--KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDH-SEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIM-SCFVF 707
            ++ + +L K+RGT  +E EF ++V A  IA+ +  +  +R+L  RR  PQL+ +  +Q FQQ TGINAI+FY PVLF +LG   SA+L +TV+ GAVNV ST++++   DK GRR LL+E GI   L+     I LG++   + +EDL    +  V+ +IC FI+ FAWSWGP+GWLIPSE F LETR AG +V V  N LF+FVI QAF+SMLC  KFG+FLFF+GW++IM  C +F
Sbjct:  238 DQGRRILEKLRGTSHVEAEFADIVAAVEIARPITMRQSWRSLFTRRYMPQLLTSFVIQFFQQFTGINAIIFYVPVLFSSLGSASSAALLNTVVVGAVNVGSTMIAVLLSDKFGRRFLLIEGGITCCLAMLAAGITLGVEFGQYGTEDLPHPVSAGVLAVICIFIAGFAWSWGPMGWLIPSEIFTLETRPAGTAVAVMGNFLFSFVIGQAFVSMLCAMKFGVFLFFAGWLVIMVLCAIF 475          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60
Identity = 118/238 (49.58%), Postives = 163/238 (68.49%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEV--KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSED-LHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIM-SCFVF 707
            E+ + VL+K+ GT +++ EF ++V A  IA+ +  +  + +L  RR  PQL+ +  +Q FQQ TGINAI+FY PVLF +LG   SA+L +TV+ GAVNV STL+++   DK GRR LL+E GIQ  L+     ++L I+   +  D L    A  ++ +IC FIS FAWSWGP+GWLIPSE F LETR AG +V V  N LF+FVI QAF+SMLC  ++G+FLFF+GW++IM  C +F
Sbjct:  238 EKGREVLQKLCGTSEVDAEFADIVAAVEIARPITMRQSWASLFTRRYMPQLLTSFVIQFFQQFTGINAIIFYVPVLFSSLGSANSAALLNTVVVGAVNVGSTLIAVMFSDKFGRRFLLIEGGIQCCLAMLTTGVVLAIEFAKYGTDPLPKAVASGILAVICIFISGFAWSWGPMGWLIPSEIFTLETRPAGTAVAVVGNFLFSFVIGQAFVSMLCAMEYGVFLFFAGWLVIMVLCAIF 475          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.115e-58
Identity = 118/236 (50.00%), Postives = 155/236 (65.68%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLL-KRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            E+ K VLRKIRG + IE EF E+  A+ +A +VK PF+ L  K  NRP LV    LQ FQQ TGIN +MFYAPVLF+T+G G +ASL STV+T  VN ++T++S+  VD  GRR LL+E  +QM  +Q  I  IL   +K           ++V+I+IC ++S FAWSWGPLGWL+PSE +PLE R+AG    V +N++ TF+I Q FLS LC F+  +F FF    +IM  FV F
Sbjct:  233 EKGKQVLRKIRGIEDIELEFNEIKYATEVATKVKSPFKELFTKSENRPPLVCGTLLQFFQQFTGINVVMFYAPVLFQTMGSGDNASLISTVVTNGVNAIATVISLLVVDFAGRRCLLMEGALQMTATQMTIGGILLAHLKLVGPITGHAVPLIVLILICVYVSGFAWSWGPLGWLVPSEIYPLEVRNAGYFCAVAMNMVCTFIIGQFFLSALCRFRSLLFFFFGIMNIIMGLFVVF 468          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.154e-55
Identity = 108/239 (45.19%), Postives = 154/239 (64.44%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDKI---EPEFLELVEASRIAKEVKHPF--RNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSE-DLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFV 704
            +E    L K+RG + I   E E  ELV +S++A E +     + +L+RR RP LV+AV +  FQQ TGI    FYAPVLF+++GFG   +L +T I G VN+ S L+S   +D+ GRR L +  GI M L Q  +A++L + V    + ++  G+AV VV+++C + + F WSWGPL WL+PSE FPL+ R AGQS++V VN   TF ++Q FL+ LC FK+G FLF+ GW+  M+ FV
Sbjct:  234 DEAHTSLLKLRGVENIADVETELAELVRSSQLAIEARAELFMKTILQRRYRPHLVVAVVIPCFQQLTGITVNAFYAPVLFRSVGFGSGPALIATFILGFVNLGSLLLSTMVIDRFGRRFLFIAGGILMLLCQIAVAVLLAVTVGATGDGEMKKGYAVTVVVLLCIYAAGFGWSWGPLSWLVPSEIFPLKIRPAGQSLSVAVNFAATFALSQTFLATLCDFKYGAFLFYGGWIFTMTIFV 472          
The following BLAST results are available for this feature:
BLAST of FC930631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
STP8_ARATH7.445e-7156.17Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP10_ARATH3.695e-7052.97Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP9_ARATH4.826e-7054.20Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STP4_ARATH5.335e-6951.06Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
HUP2_CHLKE5.714e-6350.00H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
STP3_ARATH1.407e-6148.07Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
HUP3_CHLKE2.401e-6150.42H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
HUP1_CHLKE7.722e-6049.58H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]
STP2_ARATH1.115e-5850.00Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
STP5_ARATH1.154e-5545.19Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34009F03EF PostHarvC1 Citrus clementina cDNA clone C34009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930631 ID=FC930631; Name=FC930631; organism=Citrus clementina; type=EST; length=712bp
GTTTCGAAGAAACGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAGGCATTCCTTTCAATGCTCTGCCATTTCAAG
TTCGGCATCTTCTTGTTCTTCTCCGGTTGGGTTTTGATCATGTCATGCTT
TGTGTTTTTCTT
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