FC930631

Overview
NameFC930631
Unique NameFC930631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11
Identity = 58/235 (24.68%), Postives = 109/235 (46.38%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLK----RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            K  L+ +RG D ++ E  E+ +     K     F ++LK    R  R QL+  + L   QQ +G+NAI +YA  ++ + G       + T  TGAVNV+ T  +++ V+ +GRR+LLL       ++  V+   L +      +D  +    + ++ + +++   A    P+  L+ +E F   +R +   V   V+ L  F +   F  +        F+ F+   L+ + ++F
Sbjct:  231 KKALQTLRGWDSVDREVAEIRQEDEAEKAAG--FISVLKLFRMRSLRWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPKEHVQFVTAGTGAVNVVMTFCAVFVVELLGRRLLLLLGFSICLVACCVLTAALAL------QDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIF 457          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GHT2_SCHPO (High-affinity glucose transporter ght2 OS=Schizosaccharomyces pombe GN=ght2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 45/174 (25.86%), Postives = 83/174 (47.70%), Query Frame = 3
Query:  141 RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFG 656
            R +  + + +   QQ TG N   +Y   + +  G G ++   S +I  AVN   T   +Y +++ GRR  L+  GI   +   + + +    +   +   +T    ++++M C FI  FA +W P  ++I  E++P+  RS   +V    N L+ F+I+    F+     FK+G
Sbjct:  267 RYRTFLGMFVMSLQQLTGNNYFFYYGFSVMQ--GAGINSPYLSAMILDAVNFGCTFGGMYVLERFGRRNPLIIGGIWQSICFFIYSAVGSRALYHKNGTSNTRAGAVMIVMACLFIFGFAQTWAPAAYVIVGESYPVRYRSKCAAVATASNWLWNFLISFFTPFIQASIGFKYG 438          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 62/238 (26.05%), Postives = 108/238 (45.38%), Query Frame = 3
Query:    9 ETKAVLRKIRGTDKIEPEFLEL--VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDL-HTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFG---IFLFFSGWVLIMSCFV 704
            E +A   ++ G   ++    EL  ++  +  +        LL  R+   + I   L   QQ +GINA+ +++  +FK+ G     S    +  G  N+L +++++  +DKVGR++LLL + I M       A  + ++V   S  L H     L V     F+  FA   GP+  L+  E FP   R+   +  + V+ +  F +   FL +L   K G   ++  FS + L+   FV
Sbjct:  245 EAEAEFERLLGGSHVKTAMAELYKLDLDKTDEPDVVSLSELLYGRHSRVVFIGSTLFALQQLSGINAVFYFSSTVFKSAGV---PSDLGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGM-------AAAMALQVGATSSYLPHFSALCLSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLL--EKLGPRLLYSMFSTFCLMAVMFV 470          
The following BLAST results are available for this feature:
BLAST of FC930631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
GTR5_PONAB2.976e-1124.68Solute carrier family 2, facilitated glucose trans... [more]
GHT2_SCHPO6.629e-1125.86High-affinity glucose transporter ght2 OS=Schizosa... [more]
PLST2_ARATH8.658e-1126.05Probable plastidic glucose transporter 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC34009F03EF PostHarvC1 Citrus clementina cDNA clone C34009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930631 ID=FC930631; Name=FC930631; organism=Citrus clementina; type=EST; length=712bp
GTTTCGAAGAAACGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAGGCATTCCTTTCAATGCTCTGCCATTTCAAG
TTCGGCATCTTCTTGTTCTTCTCCGGTTGGGTTTTGATCATGTCATGCTT
TGTGTTTTTCTT
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