FC930631

Overview
NameFC930631
Unique NameFC930631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HXT6_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT6 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20
Identity = 64/213 (30.05%), Postives = 101/213 (47.42%), Query Frame = 3
Query:   75 VEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            VEA ++A           K +   +L++   +Q  QQ TG N   +Y   +FK +G   S S  ++++ G VN  ST V IY V++ GRR  LL     M     V A +   ++  + +D  +  G    +++  C +I  FA +W P+ +++ SETFPL  +S   S+    N L+ F+I          F  G   F+ G+V  M C VF
Sbjct:  300 VEAEKLAGNASWGELFSSKTKVLQRLIMGAMIQSLQQLTGDNYFFYYGTTIFKAVGL--SDSFETSIVLGIVNFASTFVGIYVVERYGRRTCLLWGAASMTACMVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIPYVVVSETFPLRVKSKAMSIATAANWLWGFLI-----GFFTPFITGAINFYYGYV-FMGCLVF 504          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 72/253 (28.46%), Postives = 128/253 (50.59%), Query Frame = 3
Query:    6 EETKAVLRK--IRGTDKIEPEFLELVEASRIAKEVKHP---FRNLLKR-----RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAI---ILGIKVKDH----SEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFF 710
            +  K VL++  +   D+I  + +E + +   +   K+P   F N++K       N   L+I   LQ  QQ TG N++M+++  +F+T+GF  S+++  ++I    N + TL++ + +DK+GRR +LL     M ++  + AI    LGIK        + D  + + +++++ I  + + +A   G + W   SE FP   R  G S     N   + VIA  FL+ML +    G F FF+G   + + F +F
Sbjct:  303 KRAKMVLKRSYVNTEDEIIDQKVEELSSLNQSIPGKNPITKFWNMVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAV--SIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPWQ-QSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSFFAGVACLSTIFCYF 552          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 65/199 (32.66%), Postives = 107/199 (53.77%), Query Frame = 3
Query:  138 NRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAI---ILGIKVKDH-SEDLHTGFA---VLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHF-KFGIFLFFSGWVLIMSCFVFF 710
            N   L+I   LQ  QQ TG N++M+++  +F+T+GF  S+++  ++I    N + TLV+ +S+DK+GRR +LL     M ++  V +I    LGIK     +  + +GF+   +++++ I  F + +A   G + W   SE FP   R  G S     N   + VIA  FL+ML +    G F FF+G   + + F +F
Sbjct:  334 NLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAV--SIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQ-QSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYF 529          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 54/193 (27.98%), Postives = 101/193 (52.33%), Query Frame = 3
Query:  144 PQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAV--LVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA--QAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            P++++ + +Q  QQ TG N   +Y   +F  +G     S  ++++ GAVN  ST V++Y VDK GRR  LL     M +   + A +   ++    +D  +  +   ++++  C FI +FA +W P+ ++I +ET+PL  ++   ++ V  N ++ F+I     F++    F +G    F G ++    +VFF
Sbjct:  307 PRVIMGIVIQSLQQLTGCNYFFYYGTTIFNAVGM--QDSFETSIVLGAVNFASTFVALYIVDKFGRRKCLLWGSASMAICFVIFATVGVTRLWPQGKDQPSSQSAGNVMIVFTCFFIFSFAITWAPIAYVIVAETYPLRVKNRAMAIAVGANWMWGFLIGFFTPFITRSIGFSYG--YVFMGCLIFSYFYVFF 495          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 69/234 (29.49%), Postives = 114/234 (48.72%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELV-EASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            K  L+++RGT+ +  +  E+  E    + E K     L    N R  +++A+ L + QQ +GIN I +Y+  +F+T G   S  +Y+T+  GA+N++ T VS+  V+K GRR L L   I MF     +++ L +       D     + + +  I  F+S F    GP+ W + +E F    R    ++    N +  FVIA  F  +       +F  F+G VL+ + F FF
Sbjct:  256 KKSLKRLRGTEDVTKDINEMKKEKEEASTEQKVSVIQLFTDANYRQPILVALMLHMAQQFSGINGIFYYSTSIFQTAGI--SQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVLL------DKFAWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFVIALCFQYIADFLGPYVFFLFAGVVLVFTLFTFF 481          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 68/215 (31.63%), Postives = 110/215 (51.16%), Query Frame = 3
Query:    3 FEETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRN--RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSAS-LYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSML 638
            F + + VL ++R T       L+ +  S    +VK     L K  +  R  + + V LQ+ QQ TG+N IM+YAP +F+  G+  +   ++ TVI G  NVL+T ++I  VD+ GR+  L    + M     V+  ++ I +   S      FA+ +++M   FI  FA S GPL W++ SE  PL+ R  G + +   N +   ++   FL+ML
Sbjct:  204 FVDAERVLLRLRDTSAEAKRELDEIRESL---QVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQY---FAIAMLLM---FIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTML 409          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 68/215 (31.63%), Postives = 110/215 (51.16%), Query Frame = 3
Query:    3 FEETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRN--RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSAS-LYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSML 638
            F + + VL ++R T       L+ +  S    +VK     L K  +  R  + + V LQ+ QQ TG+N IM+YAP +F+  G+  +   ++ TVI G  NVL+T ++I  VD+ GR+  L    + M     V+  ++ I +   S      FA+ +++M   FI  FA S GPL W++ SE  PL+ R  G + +   N +   ++   FL+ML
Sbjct:  204 FVDAERVLLRLRDTSAEAKRELDEIRESL---QVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQY---FAIAMLLM---FIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTML 409          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 61/224 (27.23%), Postives = 110/224 (49.11%), Query Frame = 3
Query:    3 FEETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFF 671
            FE +  VLR       +E   ++   AS   +     F +L +RR    L++ + L + QQ  GIN ++FY+  +F++ G   S +  +T   GA+ V++T +S + VDK GRR+LL  + + M +S  ++A    +K       D+++  ++L V+ +   +  F+   GP+ WLI SE  P+  +    S+    N  F+++I      +L     G F  +
Sbjct:  236 FETSLQVLRGFETDITVEVNEIKRSVASSTKRNTVR-FVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNA--ATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMTANLLLAWSSGGTFTLY 456          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 63/232 (27.16%), Postives = 118/232 (50.86%), Query Frame = 3
Query:   21 VLRKIRGTDKIEPEFLELVEAS-RIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +L+++ GT  +  +  E+ E S R+ +E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L L     M L   ++ + L +K K      +   +++ +  I  + + F    GP+ WLI +  F  + R A  +V  C N    F++   F S   +    +F+ F+ +++    F FF
Sbjct:  130 ILQRLWGTQDVAQDIQEMKEESARMRQEKQVTVLELFRAPSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--REPIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLKXK------YDTMSLVCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFVIFAVFLVAFFIFTFF 353          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19
Identity = 61/189 (32.28%), Postives = 98/189 (51.85%), Query Frame = 3
Query:  150 LVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGG-SASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFF 710
            L+  + +   QQ +GI+A++ Y+P +F   G    +  L +TV  G V  L  +V    VD+ GRR LLL +   MF S T +   L +  ++  + L      L V  + TF++ F+   GP+ W+  SE FP+  R+ G S+ V +N L + +I   FLS+       G FL F+G  + ++ +VFF
Sbjct:  285 LIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIG-LAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAG--VAVAAWVFF 470          
The following BLAST results are available for this feature:
BLAST of FC930631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
HXT6_YEAST5.982e-2030.05High-affinity hexose transporter HXT6 OS=Saccharom... [more]
ITR2_YEAST7.812e-2028.46Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
ITR1_YEAST7.812e-2032.66Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
HXT10_YEAST7.812e-2027.98Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
GTR2_MOUSE7.812e-2029.49Solute carrier family 2, facilitated glucose trans... [more]
GALP_ECOLI7.812e-2031.63Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL67.812e-2031.63Galactose-proton symporter OS=Escherichia coli O6 ... [more]
ERDL6_ARATH1.020e-1927.23Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
GTR3_RABIT2.273e-1927.16Solute carrier family 2, facilitated glucose trans... [more]
PLT2_ARATH2.969e-1932.28Putative polyol transporter 2 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionC34009F03EF PostHarvC1 Citrus clementina cDNA clone C34009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930631 ID=FC930631; Name=FC930631; organism=Citrus clementina; type=EST; length=712bp
GTTTCGAAGAAACGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAGGCATTCCTTTCAATGCTCTGCCATTTCAAG
TTCGGCATCTTCTTGTTCTTCTCCGGTTGGGTTTTGATCATGTCATGCTT
TGTGTTTTTCTT
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