FC930631

Overview
NameFC930631
Unique NameFC930631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15190 contig Ccv1_Contig15190:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 66/241 (27.39%), Postives = 118/241 (48.96%), Query Frame = 3
Query:   24 LRKIRGTDKIEPEFLELVEAS--RIAKEVKH----PFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLV-SIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGI----KVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +R +  TD+   E +  ++A   R A+EV      PF +L +R+ + +  +   L ++Q  +GINAI +Y+P +F+++G  G+     +T I G V ++ T+V  ++ VD VGRR +L        L    I   + I      K     L +G  +  +     + + +  SW    W+I SE F   TRS GQ+     N  + F+I++    M    ++G++ FF+  +L+   F++F
Sbjct:  238 MRNLEPTDRYIVEEVSYIDADLERYAREVGKGFWKPFLSLKQRKVQWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIGAYIKIAGPGSTKAEDAKLTSG-GIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISRFTPQMFIKMEYGVYFFFASLMLLSIVFIYF 477          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: HXT1_YEAST (Low-affinity glucose transporter HXT1 OS=Saccharomyces cerevisiae GN=HXT1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 55/187 (29.41%), Postives = 95/187 (50.80%), Query Frame = 3
Query:  153 VIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHT--GFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            ++ + +Q  QQ TG N   +Y  ++F+ +G   S S  ++++ G VN  ST  S+Y+VD+ GRR  L+   + M     V A +   ++  + +D  +  G    +++  C +I  FA +W P+ +++ SE FPL  +S   S+    N ++ F+I     S    F  G   F+ G+V  M C VF
Sbjct:  326 MMGIMIQSLQQLTGDNYFFYYGTIVFQAVGL--SDSFETSIVFGVVNFFSTCCSLYTVDRFGRRNCLMWGAVGMVCCYVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIAYVVISECFPLRVKSKCMSIASAANWIWGFLI-----SFFTPFITGAINFYYGYV-FMGCMVF 504          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 62/214 (28.97%), Postives = 105/214 (49.07%), Query Frame = 3
Query:   72 LVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYS-TVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            L E S + ++ +  F  L + +    L IA  L +FQQ TG  ++++YAP + +T GF  +A     +++ G + ++ T VS+  +D+VGRR LLL     M +S      +LG          +     + V  +  ++  +  S+GP+GWL+ SE FPL+ R  G S+ V VN     ++  AF  +      GI     G + ++S F  +
Sbjct:  280 LAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVIS----LFLLGSYYM-----FYKNVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIY 484          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 74/256 (28.91%), Postives = 125/256 (48.83%), Query Frame = 3
Query:    6 EETKAVLRKIRGTDK-IEPEFLELVEASRI----AKEV----------KHPFRNL-LKRRNRPQLVI--AVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLY-STVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAV-LVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKF-GIFLFFSGWVLIMSCFVFF 710
            EE K ++  +  T++  E  F +++ A+ +     KEV          K  +R L +K R   +L++  AV +  F+  TGI A++ Y+P +FK  G      L  +TV  G       +++ + +DKVGRR LLL +   M  + T +A+ L +  +         +A+ L ++    F++ F+   GP+ W+  SE FPL  R+ G S+ V VN +    ++ +FLSM       G+F  F+G  +    F FF
Sbjct:  215 EEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFG----RLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFF 466          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 69/239 (28.87%), Postives = 112/239 (46.86%), Query Frame = 3
Query:    9 ETKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRN---RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGF-GGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTG--FAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGI-FLFFSGWVLIMSCFV 704
            E   VL +     ++E E   L  A    K+ K     L   R+   R   +    LQ FQQ TGIN +M+Y+P + +  GF     +L+ ++I  A+N   T+V IY +D  GR+ L L +   + +S     +IL +     SE    G  +  L V+ +  +I  FA   GP+ W + SE +P + R     ++  VN +   ++AQ FL++      G+ FL  +G  ++   FV
Sbjct:  226 EAIQVLARTYDISRLEDEIDHLSAAEEEEKQRKRTVGYLDVFRSKELRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIIS----LLILSVSFFKQSETSSDGGLYGWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVNWISNLIVAQTFLTIAEAAGTGMTFLILAGIAVLAVIFV 460          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 65/241 (26.97%), Postives = 117/241 (48.55%), Query Frame = 3
Query:   24 LRKIRGTDKIEPEFLELVEAS--RIAKEVKH----PFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGS-ASLYSTVITGAVNVLSTLV-SIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK----VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSGWVLIMSCFVFF 710
            +R +  TD+   E +  ++A   R A+EV      PF +L + + R +  +   L ++Q  +GINAI +Y+P +F+++G  G+     +T I G V ++ T++  ++ VD VGRR +L        L    I   + I      K     L +G  +  +     + + +  SW    W+I SE F   TRS GQ+     N  + F+I++    M    ++G++ FF+  +L+   F++F
Sbjct:  238 IRNLEPTDRYIVEEISYIDADLQRYAREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIGAYIKIAGPGTTKTEEAKLTSG-GIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISRFTPQMFIKMEYGVYFFFASLMLLSVVFIYF 477          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 72/235 (30.64%), Postives = 118/235 (50.21%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            K+VL+K+RGT  +  +  E+ E SR + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC    G ++F    VL++  F+F
Sbjct:  123 KSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLC----GPYVFIIFTVLLVLFFIF 345          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 72/235 (30.64%), Postives = 118/235 (50.21%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            K+VL+K+RGT  +  +  E+ E SR + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC    G ++F    VL++  F+F
Sbjct:  184 KSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLC----GPYVFIIFTVLLVLFFIF 406          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18
Identity = 72/235 (30.64%), Postives = 118/235 (50.21%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKR-RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            K+VL+K+RGT  +  +  E+ E SR + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC    G ++F    VL++  F+F
Sbjct:  225 KSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLC----GPYVFIIFTVLLVLFFIF 447          
BLAST of FC930631 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18
Identity = 70/235 (29.79%), Postives = 117/235 (49.79%), Query Frame = 3
Query:   15 KAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF--LSMLCHFKFGIFLFFSGWVLIMSCFVF 707
            K+VL+K+RGT  +  +  E+ E SR + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +       +     + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F  +  LC    G ++F    VL++  F+F
Sbjct:  225 KSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALL------ERLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLC----GPYVFIIFTVLLVLFFIF 447          
The following BLAST results are available for this feature:
BLAST of FC930631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
QAY_NEUTR2.513e-1827.39Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
HXT1_YEAST2.513e-1829.41Low-affinity glucose transporter HXT1 OS=Saccharom... [more]
XYLL1_ARATH3.282e-1828.97D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
PLT3_ARATH3.282e-1828.91Probable polyol transporter 3 OS=Arabidopsis thali... [more]
INT1_ARATH3.282e-1828.87Probable inositol transporter 1 OS=Arabidopsis tha... [more]
QAY_NEUAF4.287e-1826.97Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
GTR1_SHEEP4.287e-1830.64Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG4.287e-1830.64Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN5.599e-1830.64Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN5.599e-1829.79Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionC34009F03EF PostHarvC1 Citrus clementina cDNA clone C34009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930631 ID=FC930631; Name=FC930631; organism=Citrus clementina; type=EST; length=712bp
GTTTCGAAGAAACGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAGGCATTCCTTTCAATGCTCTGCCATTTCAAG
TTCGGCATCTTCTTGTTCTTCTCCGGTTGGGTTTTGATCATGTCATGCTT
TGTGTTTTTCTT
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