FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 4.418e-60 Identity = 110/192 (57.29%), Postives = 134/192 (69.79%), Query Frame = 2 Query: 83 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 KFFVGGNWKCNGT E + K+VS LN A KS L V+AQN W+ KGGAFTGE+SAE LV++ WVILGHSERR ++ E ++F+G K AYALS+ LKV+AC+GE LE+RE+G T V +Q KA A+ I++W NVV+AYEPVWAIGTGKVA+P QAQEVHA +R WLKT Sbjct: 48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQV--KSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKT 237 HSP 2 Score: 29.6462 bits (65), Expect = 4.418e-60 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCN 714 NVSA+VA++ RIIYGG N Sbjct: 238 NVSADVASTVRIIYGGSVN 256
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 8.172e-59 Identity = 108/209 (51.67%), Postives = 134/209 (64.11%), Query Frame = 2 Query: 29 SSRFHRQTKQNSIVVMARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655 SS HR + + + KFFVGGNWKCNGT + + K++S LN A KS L ++ QN WV KGGAFTGE+S E L +L WVILGHSERR ++ E ++F+G K AYALS GL VIAC+GE LE+RE+G T V Q KA A+ + +WDN+V+AYEPVWAIGTGKVA+P QAQEVH +R WLK Sbjct: 47 SSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQV--KSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLK 253 HSP 2 Score: 32.7278 bits (73), Expect = 8.172e-59 Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS EVA+ TRIIYGG NG Sbjct: 255 NVSEEVASKTRIIYGGSVNG 274
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.389e-58 Identity = 106/200 (53.00%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 62 SIVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655 ++V MA KFFVGGNWKCNGT + + K+VS LN A+ KS L ++ QN WV KGGAFTGE+S E L ++ WVILGHSERR ++ E + F+G K AYAL+ GL VIAC+GE LE+RE+G T V EQ KA A+ + +W+N+V+AYEPVWAIGTGKVA+P QAQEVH +R+WLK Sbjct: 55 AVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQV--KSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLK 252 HSP 2 Score: 34.6538 bits (78), Expect = 1.389e-58 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVSAEVA+ TRIIYGG NG Sbjct: 254 NVSAEVASKTRIIYGGSVNG 273
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 4.702e-53 Identity = 104/192 (54.17%), Postives = 126/192 (65.62%), Query Frame = 2 Query: 74 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 649 M RKF VGGNWK NG + + L +S L VAAQNC+ GAFTGE+S ML +L+I WVILGHSERRA+ ES++ + DKVA+AL+ GLKVIAC+GETL++RE+G T AV QTKAIA+K+ +W NVV+AYEPVWAIGTGK A+P QAQEVHA LRKW Sbjct: 1 MGRKFCVGGNWKMNGDKASIADLCKVLTTGPLNADTEVVVGCPAPYLTLA--RSQLPDSVCVAAQNCYKVPKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTASPEQAQEVHAALRKW 190 HSP 2 Score: 26.1794 bits (56), Expect = 4.702e-53 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 1 Query: 655 DNVSAEVAASTRIIYGG 705 +NVSA+V+A+ RI YGG Sbjct: 193 ENVSADVSAAIRIQYGG 209
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.702e-53 Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + ++++TLN + K L + F V+AQNC+ GAFTGE+S M+ + WVILGHSERR + ES++ +G KVA+ALS + VI C+GE L+QRE+G T VV EQTKAIA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR+WLKT Sbjct: 3 SRKFFVGGNWKMNGDKKSLTELINTLNSGKISADTEVVCGAPTIYLDFARQK--LDAKFAVSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALSENVGVIGCIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKT 194 HSP 2 Score: 28.1054 bits (61), Expect = 4.702e-53 Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS +VA S RIIYGG G Sbjct: 195 NVSEDVAKSVRIIYGGSVTG 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.042e-52 Identity = 101/194 (52.06%), Postives = 128/194 (65.98%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + ++++TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+ALS GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK+ Sbjct: 3 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS 194 HSP 2 Score: 28.4906 bits (62), Expect = 1.042e-52 Identity = 14/20 (70.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS VA STRIIYGG G Sbjct: 195 NVSDAVAQSTRIIYGGSVTG 214
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 1.358e-52 Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + ++++TLN A+ K L + VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK+ Sbjct: 4 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDAKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS 195 HSP 2 Score: 28.4906 bits (62), Expect = 1.358e-52 Identity = 14/20 (70.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS VA STRIIYGG G Sbjct: 196 NVSDAVAQSTRIIYGGSVTG 215
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 1.770e-52 Identity = 100/194 (51.55%), Postives = 127/194 (65.46%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK+ Sbjct: 4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS 195 HSP 2 Score: 28.8758 bits (63), Expect = 1.770e-52 Identity = 14/20 (70.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS VA STRIIYGG G Sbjct: 196 NVSEAVAQSTRIIYGGSVTG 215
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 1.770e-52 Identity = 100/194 (51.55%), Postives = 127/194 (65.46%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK+ Sbjct: 4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS 195 HSP 2 Score: 28.8758 bits (63), Expect = 1.770e-52 Identity = 14/20 (70.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS VA STRIIYGG G Sbjct: 196 NVSEAVAQSTRIIYGGSVTG 215
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.307e-52 Identity = 100/194 (51.55%), Postives = 127/194 (65.46%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKT 658 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK+ Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS 195 HSP 2 Score: 28.4906 bits (62), Expect = 2.307e-52 Identity = 14/20 (70.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 658 NVSAEVAASTRIIYGGFCNG 717 NVS VA STRIIYGG G Sbjct: 196 NVSDAVAQSTRIIYGGSVTG 215 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |