FC930632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PELPB (Triosephosphate isomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31 Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK N + +E V+ L K + S+ + AQNC GAFTGEVSA M++ + VI+GHSERR E+N V ++ ALS GL VI CVGETL +RESG V++ Q + + I + +V+AYEPVWAIGTGK A+ AQA+EVH +R Sbjct: 2 RRKIVVGNWKMNNSVAESVQLATDVLAALGEGFSGCEVGIAPTYLALDATEKVIAESEVQLVAQNCHYENDGAFTGEVSARMILAVGCSSVIIGHSERRQYFGETNATVNLRIKKALSEGLNVILCVGETLAERESGVMETVISSQVREGLDGIIDISAIVIAYEPVWAIGTGKTASSAQAEEVHLFIR 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPL (Triosephosphate isomerase OS=Legionella pneumophila (strain Lens) GN=tpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31 Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK NG ++V ++VS + + L V AQN + + GA+TGE+SA ML + +V++GHSERR +E +FV K + G+ + CVGETL +RE+G T V+A+Q A++ K + + + V+AYEPVWAIGTGK ATP QAQ++H +R Sbjct: 2 RQKIVAGNWKMNGQIQQVTELVSQIEKLIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQVIAQQVLAVSAKGKDCFRDCVVAYEPVWAIGTGKTATPEQAQKIHQFIR 190
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSEHT (Triosephosphate isomerase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tpiA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.469e-31 Identity = 77/198 (38.89%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 77 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 ARK V GNWK NG+ E VK++ +N + +++ S Q GAFTGEV A+++ L +V++GHSERR++ ESND V K A A GL I CVGE+ ++E+G T +VA Q A+ EK ++ + V+AYEPVWAIGTGK A+P QAQ VH +R + +++ Sbjct: 3 ARKAMVAGNWKMNGSLELVKQMSDAINNVKSNEIDIVLFPPFPLV------SAMIASGVSTGTQTVSENTPGAFTGEVDAQLIKELGAQYVLVGHSERRSIYKESNDVVAAKFARAQQVGLTPILCVGESESEQENGKTEQIVAAQIDAVIEKLGVAALKDSVIAYEPVWAIGTGKTASPEQAQSVHKFIRDKIASLN 194
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.469e-31 Identity = 75/186 (40.32%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 92 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 V GNWK NG+ V ++V+ L ++ S H+ AQN V GAFTGE SAEML ++ ++I+GHSERR ES++ + K A +GL + C+GET + E+G T V A Q A+ + + ++ VV+AYEPVWAIGTGK ATPAQAQ VH +R Sbjct: 6 VMGNWKLNGSRHMVNELVANLRTELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAVFEGVVIAYEPVWAIGTGKSATPAQAQAVHKFIR 191
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.469e-31 Identity = 73/194 (37.63%), Postives = 111/194 (57.22%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK 655 RK V GNWK + + + +++++ L L + V+AQN +GGAFTGE+SA+ML ++ + VILGHSERRA+ +E++ + +KV AL + VI C GE L+ R+SG+ +V Q + I+ +W +VLAYEPVWAIGTG+ A+P QAQE+H +R+ ++ Sbjct: 2 RKSIVAGNWKMHKNAAQTEELLNELIAKIPAKTNAQVIVAPTFVNLQAAAAKLKNTTIGVSAQNVHQAEGGAFTGEISADMLTSIGVNTVILGHSERRAIFHETDALIANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIR 195
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_SHELP (Triosephosphate isomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.836e-31 Identity = 79/203 (38.92%), Postives = 111/203 (54.68%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTL------NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTMS 664 R+ V GNWK NGT++ +++ + + AE ++L + AQN GA+TGEVS +ML + +VI+GHSERR + E++D V +K A A GL I CVGE+ RE+ T V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L +S Sbjct: 4 RRPMVAGNWKMNGTAQLAQELFTKFATKLQNDSAEVVLCPPSIFLESVRQQLDANKEALNGCLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVS 206
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.179e-31 Identity = 77/191 (40.31%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVR-KGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELR 643 R+ V GNWK +GT V ++ L+ L + V AQN V+ + GA TGEV+ E LV V++GHSERR ++ E+++ + K A A ++GLK + C+GETLE+RE+G T+ VV Q +I E + + N V+AYEPVWAIGTG ATP QAQ+VHA +R Sbjct: 2 RRPMVAGNWKMHGTRASVAELTEGLSNLALPSGVEVAVFPPALFINQVID-GLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIR 191 HSP 2 Score: 21.9422 bits (45), Expect = 7.179e-31 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 667 AEVAASTRIIYGG 705 AEVAA +++YGG Sbjct: 199 AEVAAKVQLLYGG 211
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_OCEIH (Triosephosphate isomerase OS=Oceanobacillus iheyensis GN=tpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 77/191 (40.31%), Postives = 100/191 (52.36%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRK 646 RK + GNWK N E + ++++ + S+ VAAQN GAFTGEVS ML +L + V+LGHSERR L E+N+ V K A + L I CVGETL+QRE+ T+ +V EQ K ++N ++AYEPVWAIGTGK AT QA EV E+RK Sbjct: 2 RKKVIAGNWKMNKVLSEAGEFMNSVVPKAPKGNDVEAIVCAPFPFLSKLVEQAKGSEVKVAAQNMHFEDSGAFTGEVSPVMLKDLGVTHVVLGHSERRELFAETNELVNKKTKAAFAHDLTPIVCVGETLDQREANETMNIVGEQVKQAVAGLTNEQVAETIIAYEPVWAIGTGKTATSEQANEVCTEIRK 192
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_CARHZ (Triosephosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 82/193 (42.49%), Postives = 107/193 (55.44%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAEKISNW-DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWL 652 RK F+ GNWK T E V L ++ ++L S+ + AQN K GAFTGEVS ML ++ + +VILGHSERRA E+++ + K+ A + GL I CVGETLE+RE G T AVV Q K +A + +N+ +AYEPVWAIGTGK ATP AQEV +R+ L Sbjct: 2 RKPFIAGNWKMYKTPVEAAGFVRELIDSLKDVSGVDVAVCPPFPALWPVKEALEGSNIALGAQNMHFEKEGAFTGEVSPAMLQDIGVKYVILGHSERRAYFGETDELINQKIKAAFTWGLNPIFCVGETLEERERGITKAVVEIQVLKGLAGVTAEQAENLTIAYEPVWAIGTGKTATPDDAQEVCQFIRELL 194
BLAST of FC930632 vs. ExPASy Swiss-Prot
Match: TPIS_TREDE (Triosephosphate isomerase OS=Treponema denticola GN=tpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 76/196 (38.78%), Postives = 108/196 (55.10%), Query Frame = 2 Query: 80 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKTM 661 +KF++ NWK N E K++ + + +A L S+ + AQN + + GA TGEVS L+++ + VILGHSERR + E++D + KV AL GL+VI CVGE LE+RE+G AV Q K ++S + D V +AYEPVWAIGTGK A+P A +H+ +RK L + Sbjct: 2 KKFYIAANWKMNMNRAEAKQLATEM-KAGLKDGKNKYMIAPSFTLLQDVASVLKGSNILLGAQNMGLEEKGAHTGEVSVLQLLDVGVQAVILGHSERRHIYKETDDLINKKVKLALKHGLEVILCVGELLEEREAGHAEAVCERQIKKGLAEVSAKDLDKVTIAYEPVWAIGTGKNASPEDADAIHSSIRKTLAAL 196 The following BLAST results are available for this feature:
BLAST of FC930632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930632 ID=FC930632; Name=FC930632; organism=Citrus clementina; type=EST; length=718bpback to top |